Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq15 104 5e-17 >seq15 Length=568429 Score = 104 bits (114), Expect = 5e-17 Identities = 389/597 (65%), Gaps = 26/597 (4%) Strand=Plus/Plus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 |||||| |||| | |||| || ||||| || || ||||| || || ||||| ||||| Sbjct 410140 GTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTCCAT 410199 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 | ||||| || | | ||| ||| ||| || | || ||| |||| Sbjct 410200 GAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAGCCG 410259 Query 157378 GTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGAC 157437 |||||| || |||| |||||||| | ||| || | || | || || || ||| || Sbjct 410260 GTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCAC 410319 Query 157438 GGGAAGCGCCGACGAA-ATGAATTCGCACTCAACGCTAACAGCGTGCTTGAAAATTTCAT 157496 || ||||| | || | ||||| |||| ||| | | | || || | | || ||| || Sbjct 410320 CGGCAGCGC-GTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCA 410378 Query 157497 GAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGC---TTGTAGATGAGA-ACG-GAAG- 157550 | || | ||| ||||||||| | | ||||| ||| ||||| | || | | |||| Sbjct 410379 GCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGCGAAGT 410438 Query 157551 CCGTGGCGTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCGAACGACAAACCCTTGA 157610 ||||| || || || ||||| | | |||||| ||| ||||| || |||| | Sbjct 410439 CCGTG---TGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAG-CCCTGGC 410494 Query 157611 ACTTCTGCC---GCTTCTTCAGCCAGTAGATGGCGCAGAACGACCCACTGAACTGCACGC 157667 | || | | |||||||||||||| | | |||||||||||||| || | || Sbjct 410495 A--TCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGC 410552 Query 157668 CCTCCAGACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGAAGCGGTTTCGGGGTTC---A 157724 |||||| || ||||||| |||| |||| |||| | | || | || | Sbjct 410553 CCTCCACCGCGGCAAAGCCGATCAGCCGCTCC-----TGAA-AGCTCGCGCTGCTCCCGA 410606 Query 157725 TCCACTTCTCTGCCCAGAGCGCCTTCTTTTCGATGATTGGCATCGTCTGGATAGATCGCA 157784 ||||| | | ||||| ||||||||| | |||| || |||||||| || | ||| Sbjct 410607 TCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGCGTGCA 410666 Query 157785 TGACGTGTCTCTGCTCTTCCGTGTCCCTGAAGTAAGTCTGAATAAGCAGAGAGTACG 157841 | | || ||| ||| ||||| ||| ||| || | | |||| |||||||| Sbjct 410667 GCAGCCGCAGCTTCTCCTCCCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTACG 410723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764088717824