Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq30 96.9 3e-15 seq15 84.2 2e-11 >seq30 Length=2652413 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | |||| || | ||| | ||| ||||| || || ||||| || || Sbjct 1354001 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 1354060 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| || || ||||| || || || ||||||| || ||||| || || || Sbjct 1354061 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 1354120 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| | |||||||| Sbjct 1354121 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCAC 1354180 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | | | |||||||||||||| ||| || ||||| |||||||| Sbjct 1354181 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 1354228 >seq15 Length=568429 Score = 84.2 bits (92), Expect = 2e-11 Identities = 125/172 (73%), Gaps = 8/172 (5%) Strand=Plus/Minus Query 52894 GGCATGAACGCGACCATGATGTGCG-AGTACATCGAGTTTGTTGCGGACAGACTGTTGAT 52952 |||||||||||| ||||| ||| ||||||||||||| || |||||| | ||| || | Sbjct 410307 GGCATGAACGCGGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGT 410249 Query 52953 GCAGCTCGGTCAGCCGAAATACTATAATGCG-CGTAACCCCTTTTCG--TTTATGAACAA 53009 | |||||| || ||| |||| | || || | || |||| || ||| | | Sbjct 410248 GTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCG---TTCGAATTCATGGAGAT 410192 Query 53010 CATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || ||||| |||||||||||||||| |||||||| ||||| |||||| Sbjct 410191 GATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGAGGAAGGTGGGGGAGTAC 410140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062958265600