Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 6e-14 >seq15 Length=568429 Score = 93.3 bits (102), Expect = 6e-14 Identities = 378/588 (64%), Gaps = 12/588 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || |||||||| || ||| ||||||||||| | || || |||||| | Sbjct 410421 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 410480 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| || || ||||| || ||||| || | | |||| || ||||| Sbjct 410481 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 410539 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || || ||||||||| | | || | ||| | | || |||||| Sbjct 410540 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 410599 Query 50131 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || | |||||| ||||| || |||||||| | | || || ||||| | ||| Sbjct 410600 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 410658 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 || | | || || || | || || | | || || || | || | | Sbjct 410659 CGCGTGCAGCAGCCGCAGCTTCTCCTCCCTGTCCGTGATGTACGTGTCCAGCAGCACAGA 410718 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 ||| | ||||| || ||||| || || || || || |||||||| | ||||| Sbjct 410719 GTACGTCTCCGAGTGGATGTTCTCCATCATCAGTTGGAACCCGTAGAACGCGCGCGCCTC 410778 Query 50310 GGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACT 50369 | | || ||| || | || || | || | ||| || | ||||| ||||| || Sbjct 410779 TGGCACCTTCACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCT 410838 Query 50370 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT 50429 | | || ||||| || | ||||| || || || || || | | || | Sbjct 410839 GCCGGCGAAAAAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGTTGC 410898 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC--CTCT 50487 ||| || || || || || | || | ||| ||||| ||||| ||||| |||| Sbjct 410899 CCAGTCCTTCATGTCGTTGCCCAGGTCGATTTCCTCCACCGTCCA----GATGCAGCTCT 410954 Query 50488 GC--CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAA 50533 | || || ||| | |||||||||||| || ||||||||||||| Sbjct 410955 CCTGCTCCTTGTACTTGCGCCAGATGTCATGGTACTGGATTGGGAAAA 411002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267291635520