Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 2e-11 >seq21 Length=1141120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 216/323 (67%), Gaps = 7/323 (2%) Strand=Plus/Minus Query 157490 TGCCACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTT---GCCACCTTGATCCACG 157546 ||||| || || | || || || ||| || || ||||| |||||| || |||||| Sbjct 323859 TGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCACG 323800 Query 157547 TGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTC 157606 | || | | || || || || || |||||||| | || ||| | | ||||||||| Sbjct 323799 TAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTC 323740 Query 157607 GTAGATTTTATTTTGCTG-TTGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCC 157665 ||| ||| | |||| || | |||| | | ||| ||||| || ||||| ||||| Sbjct 323739 GTACCAGCTATGTAGCTGCCCGCCG-CGCGGATGTTGTGCACGTGCAGGCCAATGCCGCC 323681 Query 157666 GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATC 157725 | | ||| ||||| ||||| || || | |||| ||||||||| ||||| || Sbjct 323680 GGCCGCTTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTC 323621 Query 157726 -GCTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTGCCGGCAGCGA 157784 | ||| | | || || || || || ||||| ||||| || | ||||||| | Sbjct 323620 TTCCTTCGA-CGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGGCGTTAA 323562 Query 157785 ACATGGTTGGGCTTGCGTGCGTG 157807 | | ||| ||| | ||||| ||| Sbjct 323561 AGAGGGTCGGGGTGGCGTGGGTG 323539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013335269760