Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq21 298 5e-76 seq15 163 3e-35 seq30 107 2e-18 seq20 100 3e-16 >seq21 Length=1141120 Score = 298 bits (330), Expect = 5e-76 Identities = 953/1452 (66%), Gaps = 37/1452 (3%) Strand=Plus/Minus Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110 ||||| || || || | ||||||||| || |||||| || | || | ||| || || Sbjct 324874 GTACTTGTTCACAACAGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGT 324815 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 ||||| || || ||||||| ||||| || || || | ||| | ||||| |||||| Sbjct 324814 AAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGG 324755 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230 || |||| | || ||||||| ||| || | | | | ||||| || || |||| Sbjct 324754 GGCAACCAGCAGGGAGTTGCGCATGCCCACCTGCATCACCTTCTCCTTGAGGCTAGCCCA 324695 Query 145231 ATCCCATAG--CGAAGTCGG-CCTCACGTCC---CACATGTCGTACTGCAAAATGCCCTC 145284 ||||| | || || || || | | | | ||||||||| |||||| ||||||||| Sbjct 324694 GTCCCAGCGACCGCTGTTGGGCCGCGCATTCTTCCACATGTCGAACTGCAGAATGCCCTC 324635 Query 145285 GCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT 145344 ||||| |||||||| |||| ||| |||| || || ||||| || | Sbjct 324634 ACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGCGCCCTCCTCCTTCGCCAGCTC-CATCG 324576 Query 145345 -CGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTT 145403 || ||| | || | || || || || ||| || | | ||| | | || ||| | Sbjct 324575 ACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATCTCCGCGTTCACCCGCTGCGCCT 324516 Query 145404 CATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCA 145463 | | | |||||| |||| || | || || || || |||||||| | || | Sbjct 324515 CCGCCGAGACAAACGGCAGCCGCATGAGGATGAAGGCGTCCGCAAGCCCCTGCACGCCGA 324456 Query 145464 CGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTAC 145523 ||| | ||| || | |||||| || | ||||| ||||| || || || | Sbjct 324455 GGCCAACGGGGCGGTTGCGCATGTTACTGCGGCGCGCCGTCTCGACCGGGTAGTAGTTGC 324396 Query 145524 GGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTT 145580 |||| |||| || | ||| || | |||||| | ||| | | || | Sbjct 324395 GGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGCTTTGTCACGGTGTAGAGAAGCTGGT 324336 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| || || || |||||| | || ||| | ||||| || || | | Sbjct 324335 GGT--TCAGCTCGCGCTTC-TCAACGTCGACGAAGCGCGGCAGCGCGATGGAGGCGAGGT 324279 Query 145641 TACAAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTA 145699 | || || |||||||||| ||||| || |||| | || ||||| | ||| | || Sbjct 324278 TGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATCTCCGTGCATAGGTTCGAG 324220 Query 145700 CATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGC 145759 || ||||| || || ||||| | ||| || || |||||||| |||||||||||||| Sbjct 324219 CACTTGATTGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCCTTGTAGAGG 324160 Query 145760 ATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCG 145817 ||| |||| ||||| ||||| | ||||| ||||| ||| |||| || ||||| | Sbjct 324159 ATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCA--CACTTCCTGGG 324102 Query 145818 CACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877 | | | | || | ||||||||| ||||| | |||||||| ||||||| Sbjct 324101 CCTGGATCGTCTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCTGCTCAAACT 324042 Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937 | ||| ||||||||| ||||| || ||| |||||||| |||||||| ||| | Sbjct 324041 CCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGTCCACTTCC 323982 Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997 | | | || || ||| |||||||| |||||| | ||||||||| || | | ||||| Sbjct 323981 CCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGAAGAGGTCGC 323922 Query 145998 G--CGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTC 146055 | ||| || || || ||| |||| || |||| || | | | ||| ||| Sbjct 323921 GGGCGCGCTGG--TCATCTTTTCCCGTGTTGCGTTTCAGCAGCAGAAAGCCAAAGACGTC 323864 Query 146056 CGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTC 146112 |||||||| || || | ||||||||| | ||| || || || || |||||||||||| Sbjct 323863 GGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTC 323804 Query 146113 CACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCC 146172 ||||| || | ||||||| |||||||| | ||| ||| ||| ||| | | ||| Sbjct 323803 CACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCC 323744 Query 146173 GTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC 146232 ||||||| ||| | |||| | ||| | | || || | || ||| | || Sbjct 323743 GTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCACGTGCAGGCCAATGCC 323684 Query 146233 GCC-GCCGTACTTGGAT-ATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 ||| |||| ||| | | || | ||||| || ||||| |||||||||||||| ||| Sbjct 323683 GCCGGCCG--CTTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCGATG 323626 Query 146291 CTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 || || ||||| | ||| | ||| |||||||||| ||| |||| | |||| || || | Sbjct 323625 CTGTCTTCCTTCG-ACGCC-ACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGG 323568 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTT 146408 | || | |||||| | ||||| || || | | ||| | ||||| | Sbjct 323567 CGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCTTGGACATGAGGTCGTACGTCT 323508 Query 146409 CGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 | || ||||| | || |||| |||||||| | |||||| ||||||| ||| || Sbjct 323507 CACGCACGTTCTTG-AGATCTGCGCCGTGAATGCCGAGAGCGACACGCATGAACATCTGC 323449 Query 146468 TGGGGCCGCTCC 146479 || || |||||| Sbjct 323448 TGTGGACGCTCC 323437 >seq15 Length=568429 Score = 163 bits (180), Expect = 3e-35 Identities = 357/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | | ||||| | || ||||| || ||||||| |||||| ||| Sbjct 410649 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATCGGGAGCAGC---GCG 410593 Query 46144 A-CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA- 46201 | ||||| ||||| || | | |||||| ||||||||| | || ||||| || Sbjct 410592 AGCTTTCAG-GAGCGGCTGATCGGCTTTGCCGCGGTGGAGGGCATTTTCTTTTCCGGGTC 410534 Query 46202 GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGC 46260 ||| ||| || | || | | || || | || | | ||||| || |||||||| ||| Sbjct 410533 GTTCTGC-GCGCTGTTCTGGCTGAAGAAGCGCGGTC-TGATGCCAGGGCTGACGTTCAGC 410476 Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAAC 46320 |||||||| || |||||||||||||| || || |||||||| || || || || ||| Sbjct 410475 AACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACTTCGCATGCCTGCTGTACAAC 410416 Query 46321 ACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 | | | | | ||||||| ||| ||| ||||||| || || ||| |||||| Sbjct 410415 TCGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTG 410356 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC-CTGCTGGGCATGAACGC 46439 ||| ||| ||||| | | ||| ||||| | ||| ||| | ||||||||||| Sbjct 410355 AACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGG-TGCGGCTGATTGGCATGAACGC 410297 Query 46440 ACAGTCAATGTGCG-ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 || ||| ||| | ||||||||||| || |||||||| ||||| ||| ||| | Sbjct 410296 GGAGCTGATG-GCGCAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCG 410238 Query 46499 AGCCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 || |||||| | ||| || ||| | || || || || ||| | | ||||| ||| || Sbjct 410237 AGGAGAAGCACTACCACTCGACGC-AGCCGTTCGAATTCATGGAGATGATCTCGCTGCAG 410179 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 |||||||| || || ||||| | | || || ||||| Sbjct 410178 GGCAAAACAAACTTCTTCGAGAGGAAGGTGGGGGAGTA 410141 >seq30 Length=2652413 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| ||||||| |||||||| | || | || |||||||| || |||||||| || Sbjct 1354000 AGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 1354059 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||||| | Sbjct 1354060 AGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 1354119 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| ||| ||| ||| | | ||| | || ||| | | ||| | Sbjct 1354120 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCA 1354179 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | | | || || ||||| || || || ||||| || ||||| Sbjct 1354180 CCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 1354228 >seq20 Length=1057807 Score = 100 bits (110), Expect = 3e-16 Identities = 186/265 (70%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 46334 ACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGG 46393 ||||||| ||| ||| ||||||| || || ||| |||||| ||| ||| | Sbjct 880369 ACAAGCTGCCGCGCGAGCGCGTGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCG 880310 Query 46394 AGTTTTTTACGGCCGCACTGCCCGCTGCC-CTGCTGGGCATGAACGCACAGTCAATGTGC 46452 |||| | | ||| ||||| | ||| ||| | ||||||||||| || ||| || Sbjct 880309 AGTTCATCTGCGACGCGCTGCCGG-TGCGGCTGATTGGCATGAACGCGGAGCTGATG-GC 880252 Query 46453 G-ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511 | | ||||||||||| || |||||||| ||||| ||| ||| | || |||||| | Sbjct 880251 GCAGTACATCGAGTTCGTCGCGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTA 880192 Query 46512 TCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATT 46570 ||| || ||| | || || || || ||| | | ||||| ||| |||||||||| || | Sbjct 880191 CCACTCGACGC-AGCCGTTCGACTTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACT 880133 Query 46571 TTTTCGAAAAGCGCGTCGGCGAGTA 46595 | ||||| ||| | || || ||||| Sbjct 880132 TCTTCGAGAAGAGGGTGGGGGAGTA 880108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011808773120