Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq21 250 2e-61 >seq21 Length=1141120 Score = 250 bits (276), Expect = 2e-61 Identities = 515/755 (68%), Gaps = 16/755 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| || ||||| || |||||| ||| || ||| ||||| |||||| Sbjct 323546 GCCACCCCGACCCTCTTTAACGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTG 323605 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || || |||| ||| |||| ||| || | ||||| || ||||| || ||| Sbjct 323606 GTGGCGTCGAAGGAAGACAGCATCGACGGCATCTACGACACGCTGAAGGAGTGCGCGGTG 323665 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| ||| || || || || || | || ||| || | || || ||| | Sbjct 323666 ATCAGCAAAGCGGCCGGCGGCATTGGCCTGCACGTGCACAACATCCGCGCGGCGGGCAGC 323725 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || ||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 323726 TACATAGCTGGTACGAACGGCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAAC 323785 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | ||||| | || || |||||| Sbjct 323786 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTAT 323845 Query 94192 CTCGAGCCCTGGCACGCGGACGT-GCAGGCTTTCATCGACCTGC-GAAA-GAACCAC-GG 94247 ||||||||||||||||| ||||| ||||||| |||| |||| | | ||| || Sbjct 323846 CTCGAGCCCTGGCACGCCGACGTCTTTGGCTTTC----TGCTGCTGAAACGCAACACGGG 323901 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || ||| || | ||| | ||||||||||| || || ||| | ||||| || ||||| Sbjct 323902 AAAAGATGACCAGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTAT 323961 Query 94308 GAAACGCGTCGAGAAAAACTCCG---CCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 | | |||| | ||||| | | |||| || | |||||| || || || Sbjct 323962 G--AGGCGT-GTGAAAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGG 324018 Query 94365 ACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG 94424 || ||| | ||| | ||||| | | || | || ||||| || |||| Sbjct 324019 CCTCAGCGATTGCTATGGTGAGGAGTTTGAGCAGCTCTACGAGCGCTACGAGTCCGAGGG 324078 Query 94425 CAAGGCCAGGAAGGTTATGGATG-CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 | | | ||| || | | | |||||| ||||| | ||| |||| ||| Sbjct 324079 CCGCGGCGTCAAGACGATCCAGGCCCAGGAAG-TGTGGTTTGCCATCCTGGAGTCGCAGA 324137 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 | |||||||| ||| | |||| | | ||||||| | |||| |||||| |||||| Sbjct 324138 TCGAGACGGGCGGGCCGTTCATCCTCTACAAGGACGCATGCAACAGCAAGTCGAACCAGA 324197 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 || | || || |||||| ||||||| || ||||| |||||||||||||| || || | Sbjct 324198 AGAATCTTGGCACAATCAAGTGCTCGAACCTATGCACGGAGATTGTCGAGTACACGTCGC 324257 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 || | |||| || ||||| ||||| | ||||||| Sbjct 324258 CGCAGGAGACGGCGGTGTGCAACCTCGCCTCCATC 324292 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || ||||||||||| || || ||||| ||||||| || ||||||||| Sbjct 324737 AACTCCCTGCTGGTTGCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAAC 324796 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| ||||| ||||| ||| | ||| | | || ||||| ||| || ||| Sbjct 324797 GAGTGCTTCGAGCCCTTTACCTCGAACATCTACGTCCGCCGTGTGCTGAGCGGCGAGTTC 324856 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCT 95240 || || | |||||| ||||| | |||||| Sbjct 324857 CCTGTTGTGAACAAGTACCTCGTCATGGACCT 324888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722161081280