Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19 208 1e-48 seq21 143 3e-29 >seq19 Length=1061209 Score = 208 bits (230), Expect = 1e-48 Identities = 739/1136 (65%), Gaps = 33/1136 (3%) Strand=Plus/Minus Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 || || |||| ||| ||||| || || |||||||||||||| || | ||||| || Sbjct 421956 GCCTGCACCGCCGCACCGTACGCAACGGCCTCATCGGGGTTGATGGAGCGGTTCAGCTCC 421897 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 || ||| || | | ||| | || || || || || |||||||| |||||||||||| Sbjct 421896 TTGCCGCCGAAGAACTGCGAGACAATCTGCTGGATCTTTGGGATTCGGGTCGATCCACCG 421837 Query 7148 ACCAAAACGATTTCATTCACTTTC----GATTTATCGATCTTTGAGTCTCGAAGTGTTTT 7203 || | ||||| || | ||| | | | || || ||| | ||| || || Sbjct 421836 ACGAGAACGACGTCGTCCACGTCCTGCGGCTTCAT--ATCC--GCATCTGCCAGCACCTT 421781 Query 7204 TTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACG 7263 | || || || | || || ||| || |||| ||||| || || || || Sbjct 421780 CTTCACCGGCTCGAGGCACTTCTCAAACTGATCGCGGCACATCTCCTCGAAGCGCGCGCG 421721 Query 7264 GGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT--T 7321 || || | |||| ||| ||| ||||| | || || || || ||| ||| | Sbjct 421720 CGTGATCTTCGAGAAGAAGTCATTGCCCTCGTACAGCGCGTCGATCTCGATGTTTGCCGT 421661 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 ||| | | || | ||| ||||| ||||||| |||||||| || | ||| || | Sbjct 421660 CGTGGAGCTG--GACAGCGTGCGCTTCACGCGCTCGCACGCCGTGCGCAGACGGCGCGTG 421603 Query 7382 GCACGCGGGTTACCG-GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT- 7439 || || | ||| ||| | | ||| | | | || | ||| | ||||| Sbjct 421602 GCGCGGGCGTTGCCGCGGCAGTCCTTGCCGCAGCGCATCTTGAG-CTCAGTGGCGAAGTA 421544 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 ||||| | || | ||||| ||||| || || | ||| || || |||||||| || | Sbjct 421543 GTCGACG-AGGCGGTTGTCGAAGTCTTCGCCGCCAAGGTGCGTGTCACCCGCGGTTGCCT 421485 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 | || || || | || || || | | || || ||||| ||||| || || || | Sbjct 421484 TTACCTCGAACACGCCGGACTCGATCGTCAGCAGCGTCACATCGAACGTGCCGCCGCCAA 421425 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 |||| || || || ||||| || | |||| | | ||| || || |||||||||| Sbjct 421424 GGTCGAAGATCAGCACGTTGCGCTCCTTGCCGTCGTCGCCCTTGTCCAGGCCGTACGCGA 421365 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 | ||||| ||||| || || || || || || || ||| |||||||| || | | | Sbjct 421364 TGGCCGCTGCCGTCGGCTCGTTGATGATGCGCAGCACGTTGAGGCCAGCGATGGAGCCGG 421305 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 | || ||||| || || || ||||| ||||| ||||| |||||||| || | ||| |||| Sbjct 421304 CGTCCTTCGTTGCCTGGCGCTGCGAGTCGTTGAAGTACGCCGGGACGGTGATGACGGCGT 421245 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 || |||| || | ||||| || | ||||| | || ||||| || || ||||| | Sbjct 421244 CCTTGACGGTCGTGCCGAGGTAGGCCTCCGCCGTCTCCTTCATCTTCTGCAGCACCATAG 421185 Query 7797 ATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855 || ||||| || | | ||| || || | | | | || || || | Sbjct 421184 CCGAGATCTCCTCTG-GGAAAAAGGTCTTGGACTGGTTCTGGTACTCGACGCTGATGACC 421126 Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT-CGTCT--TGG 7912 || || ||| | | || ||||| | | ||| | ||||| | || || || Sbjct 421125 GGCTT-GCCG--TCCTTGACGACCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGAAGG 421069 Query 7913 ACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTG 7972 | | | ||| ||||| | ||||| | ||||| || ||||| || ||||| | Sbjct 421068 TCAGGATCGTC---GAACTTGCGGCCGATCATGCGCTTCGCGTCAAACACGGTGTTGCTC 421012 Query 7973 GGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTA 8032 ||||||||||| ||||||||||| || || ||||| || || || | || || Sbjct 421011 GGGTTCATGGCCACCTGGTTCTTCGCGGCATCGCCGATCAGGCGCTC---TGTCTCGGTG 420955 Query 8033 AACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092 || || || || || || || || || || || ||||||||||| || || || ||||| Sbjct 420954 AAGGCCACATAAGACGGCGTTGTGCGGTTACCCTGGTCGTTCGCGATGATATCCACGCGT 420895 Query 8093 TCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| ||||| ||||| |||||||| ||||| || || | || || ||||| || Sbjct 420894 TCGTTCTGCCACACGCCCACGCACGAGTACGTCGTGCCCAGGTCGATGCCGATGGC 420839 >seq21 Length=1141120 Score = 143 bits (158), Expect = 3e-29 Identities = 232/329 (71%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | ||| ||||| || ||||| || || |||| || Sbjct 452854 ATCGAAGTCCTCACCACCGAGGTGGGTATCACCGTTCGTCGCGACCACCTCGAAGAAGCC 452795 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | | || ||| ||||| ||||| || ||||| ||||| || | || | Sbjct 452794 CTCGTCGATTGTCAGCAGCGACACATCGAACGTGCCGCCACCGAGGTCGAAGACCAGGAT 452735 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | ||||||| || |||||||| || |||||||| || || || Sbjct 452734 GTTCTTCTCGCCAGCTTTGTTA------AGCCCGTACGCTATGGCCGCCGCTGTGGGCTC 452681 Query 7636 ATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCA-TCTTTCGTCGCTTGT 7693 || || || || | ||| ||| ||||| || || || ||| | || ||||| || || Sbjct 452680 GTTGATGATGCGGACGAC-GTTAAGGCCGGCGATC-TTACCGGAGTCCTTCGTTGCCTGG 452623 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || |||| ||| |||||||| || || ||||||||||| |||| | | || |||| ||| Sbjct 452622 CGCTGCGCATCATTAAAGTACGCTGGCACCGTTACGACGGCGTTCTTCACCTTCTCGCCG 452563 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 || | | || | ||| |||||||| || Sbjct 452562 AGGAAGGTCTCAGAGATCTCTTTCATCTT 452534 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 ||||||||||| || || || || || || || | |||||||||||| || | || Sbjct 1064630 GCCGCCGCCGTCGGCTCGTTGATGATGCGCAGCACCTCCAGGCCAGCAATCGTCCCGGCG 1064689 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || ||||| || || || ||||| ||||| ||||| ||||| ||||| || || || | | Sbjct 1064690 TCCTTCGTTGCCTGACGCTGCGAGTCGTTGAAGTACGCCGGCACCGTCACCACGGCCTTC 1064749 Query 7739 GTGACTTTCTTACCGAGATAC 7759 | || | ||| || || ||| Sbjct 1064750 TTCACCTGCTTGCCCAGGTAC 1064770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131466221120