Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq21 224 2e-53 seq15 199 7e-46 >seq21 Length=1141120 Score = 224 bits (248), Expect = 2e-53 Identities = 803/1234 (65%), Gaps = 41/1234 (3%) Strand=Plus/Minus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || || ||||||||| || ||||||||| || |||||||| | ||| Sbjct 324829 GTAGATGTTCGAGGTAAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGA 324770 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGG-- 213065 || || |||||||| || ||||| || ||| | || || || || || | Sbjct 324769 CGCGGTTGGCATGGGGGCAACCAGCAGGGAGTTGCGCATGCCCACCT-GC--ATCACCTT 324713 Query 213066 CGCC--GAAGCTCTGCCCAGTCCCATCTGCCAGACA-GGTCCTCGTCCTTCACGTTCCAC 213122 | || || ||| ||||||||||| | || || || || | ||| |||||| Sbjct 324712 CTCCTTGAGGCTA-GCCCAGTCCCAGCGACCGCTGTTGGGCCGCG-CATTC---TTCCAC 324658 Query 213123 ATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCA 213182 ||||| ||||||| ||||| | || | ||||||||| | | | ||| | ||| Sbjct 324657 ATGTCGAACTGCAGAATGCCCTCACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGCGCCC 324598 Query 213183 TGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATC 213242 | |||||| |||||||| |||| || | ||||| ||||||| ||||| || ||| Sbjct 324597 TCCTCCTTCGCCAGCTCCATCGACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATC 324538 Query 213243 TCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACA 213302 ||| ||| | | || ||||| | || || |||| | |||| | ||| | Sbjct 324537 TCCGCGTTCACCCGCTGCGCCTCCGCCGAGACAAACGGCAGCCGCATGAGGATGAAGGCG 324478 Query 213303 TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCA 213361 || || |||||||| || |||| ||| | ||| | || | || |||| || || || Sbjct 324477 TCCGCAAGCCCCTGCACGCCGAGGCCAACGGGGCGGTTGCGCATGTTA--CTGCGGCGCG 324420 Query 213362 CTC-CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTT 213420 | ||| | ||||| |||||| ||| || | |||||||||||| ||| | | Sbjct 324419 CCGTCTCGACCGGGTAGTAGTTGCGGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGCT 324360 Query 213421 TGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAG 213480 | || || | || || ||| || | | || | | | | || || | Sbjct 324359 TTGTCACGGTGTAGAGAAGCTGGTGGTTCAGCTCGCGCTTCTCAACGTCGACGAAGCGCG 324300 Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540 |||| |||||| ||| |||||||| || ||| |||||| | |||||||| | | Sbjct 324299 GCAGCGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAA 324240 Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600 |||| ||||| ||||| ||| ||| ||||| || |||| ||||| ||||| || Sbjct 324239 TCTCCGTGCATAGGTTCGAGCACTTGATTGTGCCAAGATTCTTCTGGTTCGACTTGCTGT 324180 Query 213601 TGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660 || | ||||||||||| ||| | || || ||||| | ||| ||| |||| || Sbjct 324179 TGCATGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGAT-- 324122 Query 213661 GGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGT 213717 ||| ||| | | | ||||| || | | |||| || ||| | | | ||||| Sbjct 324121 GGCAAACCACACTTCCTGGGCCTGGATCGTCT---TGAC-GCCGCGGCCCTCGGACTCGT 324066 Query 213718 ACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGA---CCCTGTCCAGTCCCGGACAGG 213774 | | |||||||||| | || || | || || | ||| || ||||| || | Sbjct 324065 AGCGCTCGTAGAGCTGCTCAAACTCCTCACCATAGCAATCGCTG---AGGCCCGGGCACG 324009 Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCG 213834 |||| ||| || |||| | ||| || | | || | | ||| ||||| || | Sbjct 324008 TGTTGGGATCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTG 323949 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTT---TT 213891 ||| ||||||||| ||| ||||| | || | | || || ||| | ||| || Sbjct 323948 GGATCCACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTT 323889 Query 213892 TGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGG 213951 | |||| |||||| |||||| ||| |||||||| ||||| | |||| |||||||| Sbjct 323888 TCAGCAGC---AGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGG 323832 Query 213952 CGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008 ||||| | ||| ||| ||||||||||| | ||| ||||||||| ||| | Sbjct 323831 CGCCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTA 323772 Query 214009 GGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC 214068 | | || || |||||||| ||| ||||| || || ||||| || ||| | || | Sbjct 323771 GCATTGGCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGC 323712 Query 214069 TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128 | |||| || | || || ||||| ||||| ||| ||||| ||||| | Sbjct 323711 GGATGTTGTGCACGTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCT 323652 Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162 ||| || || ||||||| | |||||||| || Sbjct 323651 TCAGCGTGTCGTAGATGCCGTCGATGCTGTCTTC 323618 >seq15 Length=568429 Score = 199 bits (220), Expect = 7e-46 Identities = 567/859 (66%), Gaps = 23/859 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| |||||||| | |||| ||||||||||| || |||| || |||||| |||| Sbjct 410137 CTGGTACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTC 410196 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 |||||| ||| || | | | || || | | ||| | | ||||||| Sbjct 410197 CATGAATTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAG 410256 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | | ||| || ||||||||| || || Sbjct 410257 CCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCG 410316 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || ||||| ||| || | ||| || ||| | | ||||| Sbjct 410317 CACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTC 410376 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 410377 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGC 410433 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||| | || ||||| || ||||||| ||||| ||| || || || Sbjct 410434 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 410493 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || || |||||||| | || ||| || || || ||||| ||||| Sbjct 410494 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 410553 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 |||||| || || || || | |||| ||| | ||||| || || || |||||| Sbjct 410554 CTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAG-CTCGCGCTGCTC-CCGATCCA 410610 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC--CCGGAAG 48373 | ||||| || |||||||||| |||||| || ||||||| ||| || | | || Sbjct 410611 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAG 410670 Query 48374 ----AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 ||||||| ||| ||| ||||| | || || |||||| | |||| | Sbjct 410671 CCGCAGCTTCT---CCTC-CCT--GTCCGTGATGTACGTGTCCAGCAGCACAGAGTACGT 410724 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || | |||||||||||||| || | ||||| ||| Sbjct 410725 CTCCGAGTGGATGTTCTCCATCATCAGTTGGAACCCGTAGAACGCGCGCGCCTCTGGCAC 410784 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 || ||| || | ||| | || | |||||||| ||||||| || || | || Sbjct 410785 CTTCACGTCGCTCATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGC 410844 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 || |||||||| ||||| || | ||| || ||||| || | | || | |||| | Sbjct 410845 GAAAAAGGCAAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGTTGCCCAGTC 410904 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTT 48668 || | ||| ||||||||||| | ||| ||||| ||||||| | | | | ||| | | Sbjct 410905 CTTCATGTCGTTGCCCAGGTCGATTTCCTCCACCGTCCAGATGCAGCTCTCCTGC-TCCT 410963 Query 48669 TGTACATGCCCCATATGTC 48687 ||||| ||| ||| ||||| Sbjct 410964 TGTACTTGCGCCAGATGTC 410982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530843781120