Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq27 132 1e-26 >seq27 Length=1326913 Score = 132 bits (146), Expect = 1e-26 Identities = 192/270 (71%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 37248 CATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCG 37307 |||||| || ||||| |||| ||| | | |||||| ||| ||||||||||| || Sbjct 179808 CATCGTGCGAGGCAAAGGAAGCGCCGCAAGCTACTGCTCCTGCTCGCACGGTGCCGGGCG 179749 Query 37308 AATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCAC 37367 ||||| | ||| || || || ||||| || | ||||||||||| ||||| Sbjct 179748 CCGCTACAGCCGCGGCGAGGCGCGCCGGCGATTCACTGTGGCAGATCATGAGGCTGCCAC 179689 Query 37368 CAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAA 37427 || |||||||||||||| || | ||| | |||||||| || || |||||||| Sbjct 179688 ACTGGGCATCGAGTGCCGCAAGGACAGCAGCGTGTTGGACGAGACACCTGCCGCTTACAA 179629 Query 37428 GGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACG---CT 37484 | ||||||||| |||||||| || || || |||||| || ||||| |||| | Sbjct 179628 GAGCATCGATGCTGTCATGGCTGCTCAGGACGACCTGGTCGAGATCGT---CACGGTATT 179572 Query 37485 GCGCCAAGTCGTTTGCGTGAAGGGTTGAGG 37514 ||| |||||| | || ||||| || ||||| Sbjct 179571 GCGGCAAGTCCTATGTGTGAAAGGGTGAGG 179542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139282922130016