Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq30 105 1e-17 >seq30 Length=2652413 Score = 105 bits (116), Expect = 1e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 ||||| || | |||||| || || || ||||| || || || || || || | | || Sbjct 1354014 CGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCC 1354073 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || || || ||||| || | || || || || || || || ||||| Sbjct 1354074 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 1354133 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || ||||| || | || || || |||| | ||| Sbjct 1354134 TCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATC 1354193 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| |||| |||||| || || || |||||| Sbjct 1354194 GTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCATT 1354229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825086616952