Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq21 426 2e-114 seq15 250 2e-61 seq30 125 7e-24 seq20 107 2e-18 seq145 86.0 6e-12 >seq21 Length=1141120 Score = 426 bits (472), Expect = 2e-114 Identities = 988/1472 (67%), Gaps = 39/1472 (3%) Strand=Plus/Minus Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 || |||| ||||| || || |||| ||||| || | ||||||||| ||||| | Sbjct 324896 GCGCGATGAGGTCCATGACGAGGTACTTGTTCACAACAGGGAACTCGCCGCTCAGCACAC 324837 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 | || | || | ||| ||||| || || || ||||||||||||| | |||||||| Sbjct 324836 GGCGGACGTAGATGTTCGAGGTAAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCG 324777 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTA 148410 ||| | || || |||||| || |||||||| |||||||||| || | | | Sbjct 324776 AGGTGGACGCGGTTGGCATGGGGGCAACCAGCAGGGAGTTGCGCATGCCCACCTGCATCA 324717 Query 148411 TTTTGCGCTTCAGAGCCGCCCAGTCCCAGAG-CGGCGACGGTGTCACG-----TTCCACA 148464 || ||| || |||||||||||| | | || | | | || ||||||| Sbjct 324716 CCTTCTCCTTGAGGCTAGCCCAGTCCCAGCGACCGCTGTTGGGCCGCGCATTCTTCCACA 324657 Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 ||||| ||||||||||||| || || ||||||||| | | | ||||| || | Sbjct 324656 TGTCGAACTGCAGAATGCCCTCACTGGCCGGGCTGCCCGTGAAGGTCTCGTACGCGCCCT 324597 Query 148525 GCGCCGCCGCCAGTTCGCAGCT-CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATT 148583 | || |||||| || || | || ||||| ||| | |||| ||||| ||| || Sbjct 324596 CCTCCTTCGCCAGCTC-CATCGACGACTCGACCGCAGCAAAGTAGATCGTTTCGAAGATC 324538 Query 148584 TGCCTGTTGA---GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAAC 148640 | | ||| | || ||||| ||| | | | |||||| |||| | | || Sbjct 324537 TCCGCGTTCACCCGCTGCGCCTCCGCCGAGA---CAAACGGCAGCCGCATGAGGATGAAG 324481 Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700 ||||| ||||| ||||| ||||| | ||||| ||| |||| ||||| | ||||| Sbjct 324480 GCGTCCGCAAGCCCCTGCACGCCGAGGCCAACGGGGCGGTTGCGCATGTTACTGCGGCGC 324421 Query 148701 GCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 || |||||| ||| |||| ||||||||| || | || || ||||| | | | Sbjct 324420 GCCGTCTCGACCGGGTAGTAGTTGCGGTCAATAACGCGGTTGAGGTTGCGTGTGATCTGC 324361 Query 148761 TTTGTAATTCTGCGCAGCAA-------TTCAAAATCGTACTTGTCATCTACGATGCATCG 148813 ||||| | || || | |||| ||| ||| ||| | ||| | | || Sbjct 324360 TTTGTCACGGTGTAGAGAAGCTGGTGGTTCAGC-TCGCGCTTCTCAACGTCGACGAAGCG 324302 Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 || ||||| ||||| || |||||||| |||||||| | ||| | ||||||| || Sbjct 324301 CGGCAGCGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGAC 324242 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 ||||| | ||| || || ||| ||||| ||| | ||||| || || |||||| Sbjct 324241 AATCTCCGTGCATAGGTTCGAGCACTTGATTGTGCCAAGATTCTTCTGGTTCGACTTGCT 324182 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT 148993 |||||| ||||||||||| || ||| |||| ||||| || || | ||||| |||| || Sbjct 324181 GTTGCATGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGAT 324122 Query 148994 G--AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTAT 149051 | || | | || ||||| || | | || || ||| ||||| |||||| Sbjct 324121 GGCAAACCA--CACTTCCTGGGCCTGGATCGTCTTGACGCCGCGGCCCTCGGACTCGTAG 324064 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGC 149111 || ||| |||| ||| |||| || ||||||||| ||| || |||||| ||| Sbjct 324063 CGCTCGTAGAGCTGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTG 324004 Query 149112 GGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACC 149171 || ||| |||| |||| || || | ||| ||| ||||||||||||| || | | Sbjct 324003 GGATCCATCAGCGTCCACTTCCCCTCGCTTTTCACACGCCTCATAAACAGATCTGGGATC 323944 Query 149172 CAGAGCGCGTACATGAGGTCGCG--CGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 || ||||| || | ||||||||| ||| || ||| || ||| ||||||| || Sbjct 323943 CACAGCGCATAGAAGAGGTCGCGGGCGCGCTG--GTCATCTTTTCCCGTGTTGCGTTTCA 323886 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 | || | || || | ||| |||||||| ||||| | || || || | ||||||| Sbjct 323885 GCAGCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCT 323826 Query 149290 TGCGCTTGCCGCC---CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 ||||||| ||||| |||||| |||| ||| | ||||||| || || || | ||| | Sbjct 323825 TGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTG 323766 Query 149347 GTTCAATGCCACTGGCAGTGCCGTTAGTAG-AGCTAATGCGACTGCCGCGCGCTCGCACT 149405 | | | || | | |||||||| ||| ||||| || ||||| ||| || | Sbjct 323765 GCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTA-TGTAGCTGCCCGCCGCGCGGATG 323707 Query 149406 TTGTGCACGTTGACGCCGATGCCGCCG-CCGTACTTTGA-GATGGCCGCGCAGTCGCCGA 149463 |||||||||| | ||| ||||||||| ||| ||||| ||| ||||||| || | Sbjct 323706 TTGTGCACGTGCAGGCCAATGCCGCCGGCCG--CTTTGCTGATCACCGCGCACTCCTTCA 323649 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 |||| ||||||||| ||||||||||| |||| | || ||| |||||||||| || Sbjct 323648 GCGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCA 323589 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCT 149583 ||||||| | |||||||| || | ||| ||| ||||||| || || | || Sbjct 323588 TTTGCGGCTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCCT 323529 Query 149584 GGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGG 149643 | ||| | ||||||| ||| ||||| | | || |||| || ||||| | | Sbjct 323528 TGGACATGAGGTCGTACGTCTCACGCACGTTCTTGAGATCTGCGCCGTGAATGCCGAGAG 323469 Query 149644 CGACGCGCATCAGCATATGCTGCGGTCGCTCC 149675 |||| ||||| | ||| ||||| || |||||| Sbjct 323468 CGACACGCATGAACATCTGCTGTGGACGCTCC 323437 >seq15 Length=568429 Score = 250 bits (276), Expect = 2e-61 Identities = 555/812 (68%), Gaps = 32/812 (4%) Strand=Plus/Plus Query 120371 TCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGC 120430 |||| || |||||||||||||||| || ||| || | | ||| || |||||||| | Sbjct 410157 TCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTCCATGAATTCGAACGGCTGCG 410216 Query 120431 TCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAA 120490 ||| || ||| ||| || ||| | | || ||||| |||||||| || ||||| | Sbjct 410217 TCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAGCCGGTCCGCGACGAACTCGA 410276 Query 120491 TGTACT-CGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACG-T 120548 |||||| ||| ||| || |||||||||||| | || | |||||||| || || || Sbjct 410277 TGTACTGCGC-CATCAGCTCCGCGTTCATGCCAATCAGCCGCACCGGCAGCG-CGTCGCA 410334 Query 120549 GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGTGGCCGGG 120608 || ||||| ||| |||| |||||| ||| || || | |||| | || || Sbjct 410335 GATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCAGCACGCGCTCGCGCGG 410394 Query 120609 CATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 || |||||| | |||| ||| ||| |||||| || ||||||||||| || ||||| Sbjct 410395 CAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTC 410454 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||||||||| || ||||||||||| |||||||| || ||||| | || | |||| | Sbjct 410455 GTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAG 410514 Query 120729 GTAGAATATGGCGGCAAAGCTGCCC-GAAAAGAACACGCCCTCCACGATGGCAAAGGCGA 120787 |||| | || ||| | | ||| |||||||| | ||||||||| ||||||| ||| Sbjct 410515 CCAGAACAGCGC-GCAGAACGACCCGGAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGA 410573 Query 120788 CCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGGCCT 120847 || ||||| || |||| |||| |||||||| || ||||||||| |||| Sbjct 410574 TCAGCCGCTCCTGAAAGCTCGC---GCTGCTCCCGATCCACCGCACGGCCCACTCCGCCT 410630 Query 120848 TTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGC-GCTCGCCCTCC 120906 | || | | |||||| ||| || | ||||| ||||||| ||| ||| ||||| Sbjct 410631 TCTTCTGGATGCACGGGATCGTCTGTATCGCGTGCAGCAGC----CGCAGCTTCTCCTCC 410686 Query 120907 ---TCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGTGCACGCACTCGATC 120963 |||| || | | | |||| | |||| | |||| ||| | | ||| ||| Sbjct 410687 CTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTACGTCTCCGAGTGGATGTTCTCCATC 410746 Query 120964 AGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCGCCCGCTGCATGTAC 121023 | || ||| ||| || ||||||| || | ||| |||| |||| | Sbjct 410747 ATCAGTTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTCAC--GTCGCT-CATG-AA 410802 Query 121024 TCGATAAGGTTAATATTCACGAT-ACT-----GTCGGCGGCGGCGAAGAACGCCAGCACG 121077 || | | || |||| |||| ||| |||| | ||||||| || || ||||| Sbjct 410803 GCGCT--GCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAAAAGGCAAGCACA 410860 Query 121078 TGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAAAATCGTCATAGTCCTTG 121137 |||||||| ||||| ||||| |||| | ||| | ||| | | | |||| ||| ||| Sbjct 410861 TGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCGT-TGC-CCAGTCCTTCAT-GTCGTTG 410917 Query 121138 GACAGGTCGACCTCCTCCACCTTCCACATGCA 121169 |||||||| ||||||||| |||| ||||| Sbjct 410918 CCCAGGTCGATTTCCTCCACCGTCCAGATGCA 410949 >seq30 Length=2652413 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | |||| ||||| ||||||||||| Sbjct 1354032 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCG 1354091 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 1354092 GCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 1354151 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||||| | |||||||| || | | || || ||||||||||| || Sbjct 1354152 ACGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTC 1354211 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 1354212 TTCACGAAGATTTGCAT 1354228 >seq20 Length=1057807 Score = 107 bits (118), Expect = 2e-18 Identities = 195/280 (70%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || |||||| || || | ||||| || ||||| |||||||||| || || || | | Sbjct 880104 CTGGTACTCCCCCACCCTCTTCTCGAAGAAGTTCGTTTTGCCCTGCAGAGAGATCATCTC 880163 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || |||||||| | ||| || ||| ||| || ||| | | || ||||| Sbjct 880164 CATGAAGTCGAACGGCTGCGTCGAGTGGTAGTGCTTCTCCTCGCCGAGCGACACCAGCAG 880223 Query 120471 TCGGTCCGCTACAAACTCAATGTACT-CGCACATGGACTGCGCGTTCATGCCCAGCAACG 120529 |||||||| || ||||| ||||||| ||| ||| || |||||||||||| | || | Sbjct 880224 CCGGTCCGCGACGAACTCGATGTACTGCGC-CATCAGCTCCGCGTTCATGCCAATCAGCC 880282 Query 120530 CCACCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 |||||||| || || || || ||||| ||| |||| |||||| ||| || || Sbjct 880283 GCACCGGCAGCG-CGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATC 880341 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCG 120628 | |||| | || |||| |||||| | |||| ||| Sbjct 880342 TCCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCG 880381 >seq145 Length=2684 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 19954 CACGCGCACGTAGCCCTCCTCGCCGTAGTCGGCGCCCCACGAGTTTTTGATCGTCCAGTA 20013 ||||||||||||||| | |||||| |||| | ||||||||||| |||||| |||||| Sbjct 1242 CACGCGCACGTAGCCTTTCTCGCCCCAGTCCTCACCCCACGAGTTCTTGATCACCCAGTA 1183 Query 20014 CGGCACGTTGTTCTCGACGCCGTAGCCCACGAGCAGCACCGCGTGGTTCAGC 20065 ||| || | | | |||| || ||||||||||| ||||||||||| Sbjct 1182 CGGAACCTCACCAGTCATGTCGTACCCAACGAGCAGCACGCCGTGGTTCAGC 1131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419784816320