Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq33 233 2e-56 >seq33 Length=500272 Score = 233 bits (258), Expect = 2e-56 Identities = 416/598 (70%), Gaps = 22/598 (4%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || |||| || ||||||||| |||||||||| ||||| || ||||||||||||| || Sbjct 370266 TTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGCACAAGCTCA 370207 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||| || || ||| | | ||| | | | ||||||||||| |||| ||| ||| Sbjct 370206 CCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATG 370147 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC- 147095 ||||||||||| || || |||||||| | ||| | |||||||| | ||| || ||||| Sbjct 370146 TTGAAGGGGACGCCAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAGGATAGCTCG 370087 Query 147096 CCCGT-----CGGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | ||| | |||||| ||||| ||| || | ||||||||||||||||||||| Sbjct 370086 CTCGTGTCTGTGTTCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTT 370028 Query 147150 GGGCAGGTCCGCG---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCT 147206 |||| |||| ||||||||||| | ||| | || || | | | |||||| Sbjct 370027 TTGCAG---CGCGCACGGGTTCCAGGCAGTGACTAGGAGGCGGCGGTCGTTCGGGTTCGC 369971 Query 147207 CTTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGT 147263 ||| | |||| |||| | | | | ||||||||| || | ||| ||||||| | Sbjct 369970 CTTGATGGTCTCCACGATGA---GCTTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGC 369914 Query 147264 CCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAG 147323 | | | || ||| ||||| ||||| | ||||||||||||||| || || || || Sbjct 369913 CTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAG 369854 Query 147324 GTCGCCGGGCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGG 147382 ||| ||| | | | ||||| || | | | |||||||||| | || |||| | Sbjct 369853 GTCCATCTCCTTATTCTCTGTCAAGCCGCGGCTG-TCGAGAAACTCGCGCGAGCCGTTGC 369795 Query 147383 CGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 ||||||||||| | ||||| | | ||| ||| | ||| || || | || Sbjct 369794 CGTCCCAGATGTGAATGTCCTTGTCTGCCAGCACCTGCGCACTCGTCTCCCCGCGCAGGA 369735 Query 147443 ACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 |||| ||||||||||| | || || | ||| ||||| | ||| || |||||||| || Sbjct 369734 ACCACAGCAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTCAGCAGCGG 369677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486774675200