Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq30 91.5 1e-13 seq21 84.2 2e-11 >seq30 Length=2652413 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| |||| |||| || | ||| || || || || || |||||||| Sbjct 1354001 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGA 1354060 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || ||||| || |||||| | || || ||||| || |||||||| Sbjct 1354061 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 1354120 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| |||| | | || | ||||| | | || || Sbjct 1354121 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCAC 1354180 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | || | ||||| ||||| || ||||| ||||||||||| Sbjct 1354181 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 1354228 >seq21 Length=1141120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 252/386 (65%), Gaps = 5/386 (1%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTT-CTGTTCAACTCGCTTCATAAACAAATCCGGC 131671 ||||| ||| |||| |||| || | || |||| | ||| ||||||||| ||| || Sbjct 324005 TGGGATCCATCAGCGTCCACTTCCCCTCGCTTTTCA-CACGCCTCATAAACAGATCTGGG 323947 Query 131672 ACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttC 131731 | ||| | ||| || || || || | || | || ||| | ||| | | |||| Sbjct 323946 ATCCACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTC 323887 Query 131732 AAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCT 131791 | | |||| | || | ||| || |||||||| || | ||| || || | ||||| Sbjct 323886 AGCAGCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCC 323827 Query 131792 TTGCGCTTACCG---CCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATG 131848 |||||||||||| || || | || | || | |||||||| | ||||| | ||| Sbjct 323826 TTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATT 323767 Query 131849 GGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATT 131908 ||| | | ||||| | | || || || | ||||||||||| || | ||| Sbjct 323766 GGCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATG 323707 Query 131909 TTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGA 131968 ||||| |||| || ||||| || ||| | ||| ||| | ||||| | | || Sbjct 323706 TTGTGCACGTGCAGGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGC 323647 Query 131969 GTGTTATAGATACCTTCCACGCTGTC 131994 |||| ||||| || || | |||||| Sbjct 323646 GTGTCGTAGATGCCGTCGATGCTGTC 323621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933529946816