Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq21 102 3e-16 >seq21 Length=1141120 Score = 102 bits (112), Expect = 3e-16 Identities = 290/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 254834 GAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGATGCGCATTCGTGAGTCAATCG 254893 |||||||| ||| | ||||||| ||| ||||| | ||||| | | || || || Sbjct 323618 GAAGACAGCATCGACGGCATCTACGACACGCTGAAGGAGTGCGCGGTGATCAGCAAAGCG 323677 Query 254894 AGCGGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGAT-TCGCTC 254952 ||||||| | || || || | |||| | ||||| |||| || | | | ||| Sbjct 323678 GCCGGCGGCATTGGCCTGCACGTGCACAACATCCGCGCG-GCGGG-CAGCTACATAGCTG 323735 Query 254953 G-ACGAACGG-ACG--GAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGG 255008 | |||||||| ||| || ||| || | | |||||| | || || ||||||||| | Sbjct 323736 GTACGAACGGCACGTCGAACGG--GC-TCGTGCCAATGCTACGCGTCTTCAACAACACCG 323792 Query 255009 CTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGC 255068 | |||||||| || || || ||||| || ||| || || || || |||| || |||| Sbjct 323793 CCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGC 323852 Query 255069 CGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGC 255128 | |||||||||||| | | ||| | |||||| ||| || || | || || | Sbjct 323853 CCTGGCACGCCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACC 323912 Query 255129 TGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGG 255188 | |||||||||| ||| | || | ||| | |||||||||||| | || ||| Sbjct 323913 AGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTGTGA 323972 Query 255189 AACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTT 255248 || | || | || |||| || ||| ||||||| | || || || ||| | | Sbjct 323973 AAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCT 324032 Query 255249 GGGGTGACGAGTTTGA 255264 ||||| |||||||| Sbjct 324033 ATGGTGAGGAGTTTGA 324048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588332581106760