Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq15 114 2e-20 >seq15 Length=568429 Score = 114 bits (126), Expect = 2e-20 Identities = 348/531 (66%), Gaps = 20/531 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || ||||| ||| | |||||||||||||||| || || | || ||| ||||||| Sbjct 410141 TACTCCCCCACCTTCCTCTCGAAGAAGTTTGTTTTGCCCTGCAGCGAGATCATCTCCATG 410200 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTC--CAATCTGTTTGAGGAGAC 129845 || || || || | | | |||| | |||| ||| | | | || || | Sbjct 410201 AATTCGAACGGCTGCGTCGAGTGGTAG--TGCTTCTCCTCGCCGAGCGACACCAGCAGCC 410258 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| |||| |||| ||||||| | |||| ||| | |||||| || || || Sbjct 410259 GGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGCGTTCATGCCAATCAGCCGCA 410318 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 || |||||||| |||||||| | ||| |||| ||| || ||| | || | Sbjct 410319 CCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCATCCACGATAATCTCCA 410378 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACG---GC 130017 | | | ||| || | ||| || ||| | || ||| | || || | || Sbjct 410379 GCACGCGCTCGCGCGGCAG--CTTGTGCTTGATGTGCGAGTTGTACAG---CAGGCATGC 410433 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 || ||| ||| ||||||||||| || |||||||| || || ||| ||| ||||| Sbjct 410434 GAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGG 410493 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| ||||| |||||||||| |||||| | ||| || || || || || ||||| || || Sbjct 410494 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCC 410553 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197 |||||| || || | | || ||||| || ||| | | | | | ||| Sbjct 410554 CTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCA 410610 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | || ||||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 410611 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 410661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433901286080