Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000227135.2_202011-12-13] 36 sequences; 32,444,968 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 206 3e-48 >seq6 Length=529559 Score = 206 bits (228), Expect = 3e-48 Identities = 452/668 (68%), Gaps = 22/668 (3%) Strand=Plus/Minus Query 145686 GGGCTCC-ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGG 145744 |||| || ||||||||| |||||||||| ||||| || ||| ||| | | || |||| Sbjct 384252 GGGCACCGACGTGGTTGCGGTAGACGTGGGCGTCACCAAGGGTGTGCACAAGCTCACCGG 384193 Query 145745 GCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGA 145804 || |||||||| | ||| | | | ||| ||||| | |||| ||| ||||||| Sbjct 384192 GCCGCAGGCCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGA 384133 Query 145805 AGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC---CC 145861 | || || || || |||||||| | |||||||||||||||| |||||| ||||| | Sbjct 384132 AAGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGATAGCTCGCTCG 384073 Query 145862 CGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGC 145917 | ||| ||||||||| || ||| || | |||||| |||||||| ||||| || Sbjct 384072 TGTCCGTGTTCACGTAGAATTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTTTTGC 384014 Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATC 145977 || | |||||||||||| |||| | || | | | | |||||| ||||||| Sbjct 384013 AGCGCGCACGGGTTCCAGGCAGTGAATAGAAGGCGGCGGTCGTTCGGGTTCGCCTTGATC 383954 Query 145978 TCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCC 146037 | | | | | ||||| ||||||||| || | || ||| | | | | || Sbjct 383953 GTCTCCACGATGGACCTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCTTCAAACCCC 383894 Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC----CC 146093 ||| | ||||||||||| | ||||||||| |||||||| || || |||||| || Sbjct 383893 TTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTCCATCTCC 383834 Query 146094 GGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCC 146152 || |||| | |||| ||| | | |||| || || || || |||||| |||||| Sbjct 383833 TTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGCGAGCCGTTGCCGTCCC 383779 Query 146153 AGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGA 146212 |||| | | | || | | | ||| | | || ||| ||| | | |||||| | Sbjct 383778 AGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCCCCGCGCAGGAACCACA 383719 Query 146213 GCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGG---GGAACT 146269 ||||||| ||| || || | ||||||||| | ||| || |||||||| | || | Sbjct 383718 GCAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTCAGCAGCGGCAGGCGGT 383659 Query 146270 GGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCC 146329 | | || |||||| | ||| | ||||||| | | |||||||||||| || | Sbjct 383658 TGTCGCGTAGGGAGAAGCGCATCTGTGCGCCGAAGAGGCTGATGGTGCCCACGCCGGTGC 383599 Query 146330 TGTCCCCC 146337 |||| || Sbjct 383598 GGTCCTCC 383591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076534465440