Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000227135.2_202011-12-13] 36 sequences; 32,444,968 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6 156 4e-33 >seq6 Length=529559 Score = 156 bits (172), Expect = 4e-33 Identities = 288/418 (69%), Gaps = 16/418 (4%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| | | ||||||||| ||| |||||||||||||| | ||||||||||| || || Sbjct 384253 AGGGCACCGACGTGGTTGCGGTAGACGTGGGCGTCACCAAGGGTGTGCACAAGCTCACCG 384194 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || ||||||||| | | || || || || || || |||||| ||||||||| Sbjct 384193 GGCCGCAGGCCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTG 384134 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCC-- 21102 || ||||| ||||| ||||||||| || | |||||||||| |||||| ||||| | Sbjct 384133 AAAGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGATAGCTCGCTC 384074 Query 21103 ---CCCGAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCG 21158 ||| | |||||| || ||| | | ||| || || || || |||||| Sbjct 384073 GTGTCCGTGTTCACGTAGAATTGAGCAAGCAAGTGGCACGGCGGCAGCGCCATCTTTTGC 384014 Query 21159 AGGTCCGCG---GGGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGT 21213 || |||| |||||||| || | | | ||| || |||| ||| |||| | Sbjct 384013 AG---CGCGCACGGGTTCCAGGCAGTGAATAGAAGGCGGCGGTCGTTCGGGTTCGCC--T 383959 Query 21214 TAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGG 21273 | || ||||| | | | | | |||||||||||| | || |||||||| || || Sbjct 383958 TGATCGTCTCCACGATGGACCTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCTTCAA 383899 Query 21274 CCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 |||| |||| || ||||| || || | ||||||||| ||||| || || || || || Sbjct 383898 ACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTC 383841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775812313280