Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000227135.2_202011-12-13] 36 sequences; 32,444,968 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq28 239 6e-58 seq26 145 1e-29 >seq28 Length=1171725 Score = 239 bits (264), Expect = 6e-58 Identities = 1003/1573 (64%), Gaps = 14/1573 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || ||||| || || || Sbjct 1093278 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTGTGGCAGAACGAACGC 1093219 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| || || || ||||||||||| || || Sbjct 1093218 GTGGATATCATCGCGAACGACCAGGGCAACCGCACGACACCGTCGTACGTTGCGTTCACG 1093159 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || |||||||| || || ||| || |||||||| ||| Sbjct 1093158 GACTCGGAGCGCCTGATCGGCGATGCCGCGAAGAACCAGGTGGCAATGAACCCGCACAAC 1093099 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| || ||||| |||||||| || | || || Sbjct 1093098 ACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTTCAACGACTCGGTTGTGCAGTCG 1093039 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | | ||| || || | | | || ||||| |||||| Sbjct 1093038 GACATGAAGCACTGGCCGT-TCAAGGTGACGACGAAGGGCGACGACAAGCCCATGATTGC 1092980 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | | | ||| ||| |||| || | || || || || || |||||| | Sbjct 1092979 GGTGCAGTACCGCGGCGAGGAGAAGACCTTCACGCCGGAGGAGATCAGCTCGATGGTGCT 1092920 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||||||||||| ||||| | | | |||| || ||||| | || || || Sbjct 1092919 GCTGAAGATGAAGGAGACGGCGGAGGCGTACCTGGGCAAGCAGGTGAAGAAGGCCGTGGT 1092860 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || || || || ||||| || |||||||| | | || Sbjct 1092859 GACGGTGCCGGCGTACTTCAACGACTCGCAGCGCCAGGCAACGAAGGACGCCGGCACGAT 1092800 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || || | || | || ||||| || || || ||||| || || || || || Sbjct 1092799 TGCTGGCCTGGAGGTGCTGCGCATCATCAACGAGCCGACGGCGGCGGCCATCGCGTACGG 1092740 Query 195838 TCTGGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||||||||| | | |||| | || || || ||||||| || || || || || Sbjct 1092739 CCTGGACAAGGGCGACGACGGCAAGGAGCGCAACGTGCTGATCTTCGACCTTGGCGGCGG 1092680 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||||| ||||| | || | | || || || || || ||||| || ||||| || Sbjct 1092679 CACGTTCGATGTGACGCTGTTGACGATCGACGGCGGCATCTTCGAGGTGAAGGCGACGAA 1092620 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTG 196013 || || || || || || || || || ||||| || || || ||| || | | Sbjct 1092619 CGGCGACACGCACCTTGGCGGCGAGGACTTCGACAACCGCCTCGTCACGT-TCTTCACCG 1092561 Query 196014 ATGAGTTCCGTCGAAAGAATAA--GAAAGATATTTCTGGAAATCC-TAGGGCTCTTCGTC 196070 | |||||| || ||||| || | |||| | | | || | || || || | Sbjct 1092560 AGGAGTTCAAGCGCAAGAACAAGGGTAAGAACCTGGCGTCGAGCCACCGCGCGCTGCGCC 1092501 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | || | || || || || || || || || || || || || || | || | | | Sbjct 1092500 GTCTGCGCACGGCGTGCGAGCGCGCGAAGCGCACGCTGTCGTCCGCGACGCAGGCGACGA 1092441 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAA--TTGACTTCTATACAACTATTACCCGTGCACG 196188 | ||||| || || |||| || ||| ||||||| | | || || || || || || Sbjct 1092440 TCGAGATCGACGCGCTGTTCGA--GAACGTTGACTTTCAGGCCACCATCACGCGCGCGCG 1092383 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 || || ||| | | || |||| | | || | || || || | || || Sbjct 1092382 CTTCGAGGAGCTGTGCGGCGACCTGTTCCGCAGCACGATCCAGCCGGTGGAGCGCGTGCT 1092323 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 | ||||| |||||||| ||| || | || | || || ||||| || ||||| Sbjct 1092322 GCAGGACGCGAAGATGGACAAGCGCTCCGTGCACGACGTGGTGCTGGTGGGCGGGTCAAC 1092263 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368 || || |||||| | || | | || ||||||| || || | ||||| Sbjct 1092262 GCGCATCCCGAAGGTGCAGTCCCTCGTGTCGGACTTCTTCGGCGGCAAGGAGCTGAACAA 1092203 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | |||||||| || || || || || || || ||||| || ||||| || || | Sbjct 1092202 GAGCATCAACCCCGACGAGGCTGTCGCGTACGGCGCGGCGGTGCAGGCCTTCATCCTGAC 1092143 Query 196429 AGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 || | | | || | | | || ||||| || || || | || | | || Sbjct 1092142 GGGCGGCAAGAGCAAGCAGACGGAGGGCCTGCTGCTGCTGGACGTGACGCCGCTGACGCT 1092083 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| | || || || || || || ||||| | || | | ||||| || ||||| Sbjct 1092082 GGGCATCGAGACGGCCGGCGGCGTGATGACGGCGCTGATCAAGCGCAACACGACGATTCC 1092023 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 ||| |||||| || |||| || ||||| | || || || || || || || || || Sbjct 1092022 GACCAAGAAGAGCCAGATCTTCTCGACGTACGCGGACAACCAGCCCGGCGTGCACATCCA 1091963 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 || | || || || ||| | | ||||| ||| || || || || ||||| | Sbjct 1091962 GGTCTTCGAGGGCGAGCGCGCGATGACGAAGGACTGCCACCTGCTGGGCACGTTCGACCT 1091903 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 | | || || || | || || | ||||| || ||||| | || ||||| | || Sbjct 1091902 GTCCGGCATCCCGCCGGCGCCGCGCGGTGTGCCGCAGATCGAGGTGACGTTCGACCTGGA 1091843 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 |||||| || || || ||||| | || ||||| |||| | ||||| | |||| Sbjct 1091842 CGCAAACGGCATCCTGAACGTGTCCGCGGAGGAGAAGGGCACCGGCAAGCGCAACCAGAT 1091783 Query 196789 TGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 || ||||| |||||||| ||||| ||||| || || || || ||||| | || Sbjct 1091782 CACCATCACCAACGACAAGGGCCGGCTGAGCAAGGACGAGATCGAGCGCATGGTGAACGA 1091723 Query 196849 TGCGGAAAAGTAC 196861 ||| |||||| Sbjct 1091722 CGCGATGAAGTAC 1091710 Score = 116 bits (128), Expect = 5e-21 Identities = 231/340 (68%), Gaps = 8/340 (2%) Strand=Plus/Plus Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 |||||| || ||||||||||||| | || | ||| | || | | ||||| | Sbjct 460798 ATGGTGCTGCAGAAGATGAAGGAGATCTCTGAGACCTTCCTCGGCGAGAAGGTGAAGAAC 460857 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || ||||| || || || ||||| | |||| |||| || ||||| || ||||| | Sbjct 460858 GCCGTCGTGACGGTGCCAGCGTACTTTAATGATGCACAGCGTCAGGCAACGAAGGATTCC 460917 Query 195770 GCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | || || || || ||| ||| | | || ||||| || || |||||||| || || Sbjct 460918 GGTAAGATCGCCGGCCTTAAC-GTCGTCCGCATCATCAACGAGCCCACAGCGGCCGCCAT 460976 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888 || || || || ||||||| | || || || | || |||| || ||||| Sbjct 460977 AGCGTACGGGCT------CAACAAGGCTGGCGAGAAGAACATCCTGGTCTTCGACCTCGG 461030 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 ||| || ||||| ||||| || || || | || || | ||| | ||||| || || Sbjct 461031 TGGCGGCACGTTCGATGTGTCCCTGCTGACAATCGACGAGGGTTTCTTCGAGGTGGTCGC 461090 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||||||||| || |||||||| || |||||| Sbjct 461091 GACGAACGGTGATACTCACCTCGGTGGTGAGGACTTCGAT 461130 >seq26 Length=1058259 Score = 145 bits (160), Expect = 1e-29 Identities = 454/696 (65%), Gaps = 14/696 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || | | || || | Sbjct 411003 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTCTTCAAGAACGAGCAG 411062 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || ||||| || ||||| || || || || || || ||||| || Sbjct 411063 GTGGACATTATTGCCAACGACCAGGGTAACCGCACGACACCGTCCTATGTGGCCTTCACC 411122 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || |||||||| || || ||| || |||||||| | ||| Sbjct 411123 GAGACAGAGCGCCTGATCGGCGATGCCGCGAAGAACCAGGTGGCCATGAACCCGAGCAAC 411182 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||||||||| | || || |||||||| ||| | | || Sbjct 411183 ACCGTGTTTGACGCGAAGCGCATGATCGGCCGCAAGTTCGACGATCCTGACCTTCAGTCG 411242 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || ||| || | ||||| | || | Sbjct 411243 GACATGAAGCACTGGCCCT-TCAAGGTGA--CCGTCAAGGACGGCAAGCCGGTCATCAGC 411299 Query 195599 GTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | || || || || ||| | || || || || ||| |||||||| | Sbjct 411300 GTCGAGTACCAGAACCAGTCCAAGACCTTTTTC-CCAGAGGAGATCTCGGCTATGGTGCT 411358 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||||||||||||| ||||| | | | | || | || || || || || || | Sbjct 411359 GCAGAAGATGAAGGAGACGGCGGAGGCCTACCTCGGCACGACCGTCAAGGACGCCGTCAT 411418 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || || || ||||||| || || || || |||||||| |||||||| | | || Sbjct 411419 CACCGTCCCGGCGTACTTCAACGACTCGCAGCGCCAGGCGACGAAGGACGCCGGCTCCAT 411478 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || ||| || | || ||||| || || || || || || || || || || Sbjct 411479 CGCTGGCCTCAACGTGCTGCGCATCATCAACGAGCCCACCGCCGCCGCTATCGCGTACGG 411538 Query 195838 TCTGGA---CAAG---AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||| |||| ||||| | ||| || || || | ||||| || || || || Sbjct 411539 CATGGACCGCAAGGGAGACAAG---GGAGAGAAGAACGTGCTCATCTTCGACCTTGGCGG 411595 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || ||||| ||||| | || | | || || || | ||||| || ||||| || Sbjct 411596 CGGCACGTTCGATGTGACGCTGTTGACGATCGAGTCCGGCGTGTTCGAGGTGAAGGCGAC 411655 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || || || || || || || || ||||| Sbjct 411656 CGCGGGCGACACGCACCTTGGGGGCGAGGACTTCGA 411691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862103961920