Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000470725.1_202013-09-30] 36 sequences; 32,414,853 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq28 138 1e-27 >seq28 Length=1171705 Score = 138 bits (152), Expect = 1e-27 Identities = 521/810 (64%), Gaps = 13/810 (2%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC-GACATCGAAAACGCGAC 122974 || || ||| ||||||| |||||| | ||| | ||||| ||| || || | || | | Sbjct 330514 CAGCAGATGTTCATGCGTGTCGCTCTTGGCATTCACGG-CGCAGATCTCAAGAATGTGCG 330572 Query 122975 CGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGC 123034 || || ||||| | ||||| | || ||||| ||||| | || || | || Sbjct 330573 TGAGACGTACGACCTTATGTCCAAGGGCTTCTTCACCCACGCCACCCCGACCCTCTTTAA 330632 Query 123035 CGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAG 123094 ||||||||| | ||| || || ||||| || || | | | | |||||||| Sbjct 330633 CGCCGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGAAGACAG 330692 Query 123095 CATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 |||| ||| ||||| || || || || || || |||| |||| | |||||| Sbjct 330693 CATCGACGGCATCTACGACACGCTGAAGGAGTGTGCCGTGATCAGCAAAGCGGCCGGCGG 330752 Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGA-AGCCGCATCAGAAGCACCGACG 123213 ||| || || |||||||| || | | | | |||| ||| ||| | || ||| Sbjct 330753 CATTGGTCTGCACGTGCACAACATCCGCG-CGGCGGGCAGCTACATAGCTGGTACGAACG 330811 Query 123214 GAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCG 123273 | | | |||||||| | ||||| || || | ||| ||| ||| || |||| | Sbjct 330812 GCACGTCGAACGGGCTCGTGCCAATGCTACGCGTCTTCAACAACACCGCCCGCTACGTGG 330871 Query 123274 ACCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTG 123330 ||||||||||| || ||||| ||||| | || ||||||| || || ||||||| || Sbjct 330872 ACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCCTGGCACGCTG 330931 Query 123331 ATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCG 123390 | || | | ||| | | |||||||||| ||| || || || ||||||| Sbjct 330932 ACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACCAGCGCGCCCGCG 330991 Query 123391 ATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCG 123450 | | || ||||| | ||| | || ||| |||||||| |||| || ||| ||| || Sbjct 330992 ACCTCTTCTACGCGCTGTGGATCCCAGATCTGTTTATGAGACGTGTGAAAAGCGAGGGGA 331051 Query 123451 TGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGT 123510 |||| |||| ||| |||| | ||| || || | ||||| || || | ||| Sbjct 331052 AGTGGACGCTGATGGATCCCAACACGTGCCCGGGTCTCAGCGATTGCTATGGTGAAGAGT 331111 Query 123511 TTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCAC 123570 |||| | | |||| || |||||| ||| ||| || | | | | ||| | Sbjct 331112 TTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGGCCGCGGCGTCAAGACGATCCAGGCCC 331171 Query 123571 GTGATTTGTTCAAATTTATTATC---GAAACACAAGTCGAAACCGGAACGCCGTACATGC 123627 || ||| ||| |||| || | || |||| || ||| ||||| | | | Sbjct 331172 AGGAGGTGT---GGTTTGCTATCCTGGAGTCTCAGATCGAGACGGGAGGGCCGTTCGTCC 331228 Query 123628 TCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTA 123687 ||||||| ||||| |||||||| || | || |||| || | || || || || || Sbjct 331229 TCTACAAGGACGCATGCAACAGCAAGTCGAACCAGAAGAATCTTGGCACGATCAAGTGCT 331288 Query 123688 GTAATCTTTGCTCCGAAATTATCGAATACA 123717 || || ||| | || ||| |||| |||| Sbjct 331289 CGAACCTATGCACGGAGATTGTCGAGTACA 331318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002996598560