Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000470725.1_202013-09-30] 36 sequences; 32,414,853 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq28 239 6e-58 seq26 145 1e-29 >seq28 Length=1171705 Score = 239 bits (264), Expect = 6e-58 Identities = 1003/1573 (64%), Gaps = 14/1573 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || ||||| || || || Sbjct 1093272 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTGTGGCAGAACGAACGC 1093213 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| || || || ||||||||||| || || Sbjct 1093212 GTGGATATCATCGCGAACGACCAGGGCAACCGCACGACACCGTCGTACGTTGCGTTCACG 1093153 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || |||||||| || || ||| || |||||||| ||| Sbjct 1093152 GACTCGGAGCGCCTGATCGGCGATGCCGCGAAGAACCAGGTGGCAATGAACCCGCACAAC 1093093 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| || ||||| |||||||| || | || || Sbjct 1093092 ACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTTCAACGACTCGGTTGTGCAGTCG 1093033 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | | ||| || || | | | || ||||| |||||| Sbjct 1093032 GACATGAAGCACTGGCCGT-TCAAGGTGACGACGAAGGGCGACGACAAGCCCATGATTGC 1092974 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | | | ||| ||| |||| || | || || || || || |||||| | Sbjct 1092973 GGTGCAGTACCGCGGCGAGGAGAAGACCTTCACGCCGGAGGAGATCAGCTCGATGGTGCT 1092914 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||||||||||| ||||| | | | |||| || ||||| | || || || Sbjct 1092913 GCTGAAGATGAAGGAGACGGCGGAGGCGTACCTGGGCAAGCAGGTGAAGAAGGCCGTGGT 1092854 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || || || || ||||| || |||||||| | | || Sbjct 1092853 GACGGTGCCGGCGTACTTCAACGACTCGCAGCGCCAGGCAACGAAGGACGCCGGCACGAT 1092794 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || || | || | || ||||| || || || ||||| || || || || || Sbjct 1092793 TGCTGGCCTGGAGGTGCTGCGCATCATCAACGAGCCGACGGCGGCGGCCATCGCGTACGG 1092734 Query 195838 TCTGGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||||||||| | | |||| | || || || ||||||| || || || || || Sbjct 1092733 CCTGGACAAGGGCGACGACGGCAAGGAGCGCAACGTGCTGATCTTCGACCTTGGCGGCGG 1092674 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||||| ||||| | || | | || || || || || ||||| || ||||| || Sbjct 1092673 CACGTTCGATGTGACGCTGTTGACGATCGACGGCGGCATCTTCGAGGTGAAGGCGACGAA 1092614 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTG 196013 || || || || || || || || || ||||| || || || ||| || | | Sbjct 1092613 CGGCGACACGCACCTTGGCGGCGAGGACTTCGACAACCGCCTCGTCACGT-TCTTCACCG 1092555 Query 196014 ATGAGTTCCGTCGAAAGAATAA--GAAAGATATTTCTGGAAATCC-TAGGGCTCTTCGTC 196070 | |||||| || ||||| || | |||| | | | || | || || || | Sbjct 1092554 AGGAGTTCAAGCGCAAGAACAAGGGTAAGAACCTGGCGTCGAGCCACCGCGCGCTGCGCC 1092495 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | || | || || || || || || || || || || || || || | || | | | Sbjct 1092494 GTCTGCGCACGGCGTGCGAGCGCGCGAAGCGCACGCTGTCGTCCGCGACGCAGGCGACGA 1092435 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAA--TTGACTTCTATACAACTATTACCCGTGCACG 196188 | ||||| || || |||| || ||| ||||||| | | || || || || || || Sbjct 1092434 TCGAGATCGACGCGCTGTTCGA--GAACGTTGACTTTCAGGCCACCATCACGCGCGCGCG 1092377 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 || || ||| | | || |||| | | || | || || || | || || Sbjct 1092376 CTTCGAGGAGCTGTGCGGCGACCTGTTCCGCAGCACGATCCAGCCGGTGGAGCGCGTGCT 1092317 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 | ||||| |||||||| ||| || | || | || || ||||| || ||||| Sbjct 1092316 GCAGGACGCGAAGATGGACAAGCGCTCCGTGCACGACGTGGTGCTGGTGGGCGGGTCAAC 1092257 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368 || || |||||| | || | | || ||||||| || || | ||||| Sbjct 1092256 GCGCATCCCGAAGGTGCAGTCCCTCGTGTCGGACTTCTTCGGCGGCAAGGAGCTGAACAA 1092197 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | |||||||| || || || || || || || ||||| || ||||| || || | Sbjct 1092196 GAGCATCAACCCCGACGAGGCTGTCGCGTACGGCGCGGCGGTGCAGGCCTTCATCCTGAC 1092137 Query 196429 AGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 || | | | || | | | || ||||| || || || | || | | || Sbjct 1092136 GGGCGGCAAGAGCAAGCAGACGGAGGGCCTGCTGCTGCTGGACGTGACGCCGCTGACGCT 1092077 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| | || || || || || || ||||| | || | | ||||| || ||||| Sbjct 1092076 GGGCATCGAGACGGCCGGCGGCGTGATGACGGCGCTGATCAAGCGCAACACGACGATTCC 1092017 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 ||| |||||| || |||| || ||||| | || || || || || || || || || Sbjct 1092016 GACCAAGAAGAGCCAGATCTTCTCGACGTACGCGGACAACCAGCCCGGCGTGCACATCCA 1091957 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 || | || || || ||| | | ||||| ||| || || || || ||||| | Sbjct 1091956 GGTCTTCGAGGGCGAGCGCGCGATGACGAAGGACTGCCACCTGCTGGGCACGTTCGACCT 1091897 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 | | || || || | || || | ||||| || ||||| | || ||||| | || Sbjct 1091896 GTCCGGCATCCCGCCGGCGCCGCGCGGTGTGCCGCAGATCGAGGTGACGTTCGACCTGGA 1091837 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 |||||| || || || ||||| | || ||||| |||| | ||||| | |||| Sbjct 1091836 CGCAAACGGCATCCTGAACGTGTCCGCGGAGGAGAAGGGCACCGGCAAGCGCAACCAGAT 1091777 Query 196789 TGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 || ||||| |||||||| ||||| ||||| || || || || ||||| | || Sbjct 1091776 CACCATCACCAACGACAAGGGCCGGCTGAGCAAGGACGAGATCGAGCGCATGGTGAACGA 1091717 Query 196849 TGCGGAAAAGTAC 196861 ||| |||||| Sbjct 1091716 CGCGATGAAGTAC 1091704 Score = 116 bits (128), Expect = 5e-21 Identities = 231/340 (68%), Gaps = 8/340 (2%) Strand=Plus/Plus Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 |||||| || ||||||||||||| | || | ||| | || | | ||||| | Sbjct 460792 ATGGTGCTGCAGAAGATGAAGGAGATCTCTGAGACCTTCCTCGGCGAGAAGGTGAAGAAC 460851 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || ||||| || || || ||||| | |||| |||| || ||||| || ||||| | Sbjct 460852 GCCGTCGTGACGGTGCCAGCGTACTTTAATGATGCACAGCGTCAGGCAACGAAGGATTCC 460911 Query 195770 GCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | || || || || ||| ||| | | || ||||| || || |||||||| || || Sbjct 460912 GGTAAGATCGCCGGCCTTAAC-GTCGTCCGCATCATCAACGAGCCCACAGCGGCCGCCAT 460970 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888 || || || || ||||||| | || || || | || |||| || ||||| Sbjct 460971 AGCGTACGGGCT------CAACAAGGCTGGCGAGAAGAACATCCTGGTCTTCGACCTCGG 461024 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 ||| || ||||| ||||| || || || | || || | ||| | ||||| || || Sbjct 461025 TGGCGGCACGTTCGATGTGTCCCTGCTGACAATCGACGAGGGTTTCTTCGAGGTGGTCGC 461084 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||||||||| || |||||||| || |||||| Sbjct 461085 GACGAACGGTGATACTCACCTCGGTGGTGAGGACTTCGAT 461124 >seq26 Length=1058257 Score = 145 bits (160), Expect = 1e-29 Identities = 454/696 (65%), Gaps = 14/696 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || | | || || | Sbjct 411003 GCCATCGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTCTTCAAGAACGAGCAG 411062 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || ||||| || ||||| || || || || || || ||||| || Sbjct 411063 GTGGACATTATTGCCAACGACCAGGGTAACCGCACGACACCGTCCTATGTGGCCTTCACC 411122 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || |||||||| || || ||| || |||||||| | ||| Sbjct 411123 GAGACAGAGCGCCTGATCGGCGATGCCGCGAAGAACCAGGTGGCCATGAACCCGAGCAAC 411182 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||||||||| | || || |||||||| ||| | | || Sbjct 411183 ACCGTGTTTGACGCGAAGCGCATGATCGGCCGCAAGTTCGACGATCCTGACCTTCAGTCG 411242 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || ||| || | ||||| | || | Sbjct 411243 GACATGAAGCACTGGCCCT-TCAAGGTGA--CCGTCAAGGACGGCAAGCCGGTCATCAGC 411299 Query 195599 GTTGAATTTCACGGTGAGAAGAA-ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | || || || || ||| | || || || || ||| |||||||| | Sbjct 411300 GTCGAGTACCAGAACCAGTCCAAGACCTTTTTC-CCAGAGGAGATCTCGGCTATGGTGCT 411358 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||||||||||||| ||||| | | | | || | || || || || || || | Sbjct 411359 GCAGAAGATGAAGGAGACGGCGGAGGCCTACCTCGGCACGACCGTCAAGGACGCCGTCAT 411418 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || || || ||||||| || || || || |||||||| |||||||| | | || Sbjct 411419 CACCGTCCCGGCGTACTTCAACGACTCGCAGCGCCAGGCGACGAAGGACGCCGGCTCCAT 411478 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || ||| || | || ||||| || || || || || || || || || || Sbjct 411479 CGCTGGCCTCAACGTGCTGCGCATCATCAACGAGCCCACCGCCGCCGCTATCGCGTACGG 411538 Query 195838 TCTGGA---CAAG---AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||| |||| ||||| | ||| || || || | ||||| || || || || Sbjct 411539 CATGGACCGCAAGGGAGACAAG---GGAGAGAAGAACGTGCTCATCTTCGACCTTGGCGG 411595 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || ||||| ||||| | || | | || || || | ||||| || ||||| || Sbjct 411596 CGGCACGTTCGATGTGACGCTGTTGACGATCGAGTCCGGCGTGTTCGAGGTGAAGGCGAC 411655 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || || || || || || || || ||||| Sbjct 411656 CGCGGGCGACACGCACCTTGGGGGCGAGGACTTCGA 411691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862103961920