Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000470725.1_202013-09-30] 36 sequences; 32,414,853 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 233 2e-56 >seq6 Length=529559 Score = 233 bits (258), Expect = 2e-56 Identities = 412/591 (70%), Gaps = 17/591 (3%) Strand=Plus/Minus Query 146922 GGGCTCC-ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCG 146980 |||| || ||||||||| |||||||||| ||||| || ||||||||||||| || || | Sbjct 384252 GGGCACCGACGTGGTTGCGGTAGACGTGGGCGTCACCAAGGGTGTGCACAAGCTCACCGG 384193 Query 146981 GCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 || ||||| ||| | | ||| | | | ||||||||||| |||| ||| ||||||| Sbjct 384192 GCCGCAGGCCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGA 384133 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC-CCCG 147099 | ||||| || || |||||||| | ||| | |||||||||| ||| || ||||| | || Sbjct 384132 AAGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGATAGCTCGCTCG 384073 Query 147100 T-----CGGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGC 147153 | | |||||| || || ||| || | ||||||||||||||||||||| || Sbjct 384072 TGTCCGTGTTCACGTAGAATTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTTTTGC 384014 Query 147154 AGGTCCGCG---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTA 147210 || |||| ||||||||||| | || | || || | | | |||||| ||| Sbjct 384013 AG---CGCGCACGGGTTCCAGGCAGTGAATAGAAGGCGGCGGTCGTTCGGGTTCGCCTTG 383957 Query 147211 ATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAG 147270 ||| || | | |||| | ||||||||| || | ||| ||||||| | | | Sbjct 383956 ATCGTCTCCACGATGGACCTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCTTCAAAC 383897 Query 147271 TCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCG 147330 || ||| ||||| ||||| | ||||||||||||||| || || || ||||| Sbjct 383896 CCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTCCATC 383837 Query 147331 GGCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCA 147389 ||| | | | ||||| || | | | |||||||||| | || |||| | ||||||| Sbjct 383836 TCCTTATTCTCTGTCAAGCCGCGGCTG-TCGAGAAACTCGCGCGAGCCGTTGCCGTCCCA 383778 Query 147390 GATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAG 147449 |||| | ||||| | | ||| || | || ||| || || | |||||| || Sbjct 383777 GATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCCCCGCGCAGGAACCACAG 383718 Query 147450 CAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 ||||||||| | || || | ||| ||||| | ||| || |||||||| || Sbjct 383717 CAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTCAGCAGCGG 383667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487737430400