Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000470725.1_202013-09-30] 36 sequences; 32,414,853 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq28 111 5e-19 >seq28 Length=1171705 Score = 111 bits (122), Expect = 5e-19 Identities = 292/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 254834 GAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGATGCGCATTCGTGAGTCAATCG 254893 |||||||| ||| | ||||||| ||| ||||| | || || | | || || || Sbjct 330685 GAAGACAGCATCGACGGCATCTACGACACGCTGAAGGAGTGTGCCGTGATCAGCAAAGCG 330744 Query 254894 AGCGGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGAT-TCGCTC 254952 ||||||| | || || || | |||| | ||||| |||| || | | | ||| Sbjct 330745 GCCGGCGGCATTGGTCTGCACGTGCACAACATCCGCGCG-GCGGG-CAGCTACATAGCTG 330802 Query 254953 G-ACGAACGG-ACG--GAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGG 255008 | |||||||| ||| || ||| || | | |||||| | || || ||||||||| | Sbjct 330803 GTACGAACGGCACGTCGAACGG--GC-TCGTGCCAATGCTACGCGTCTTCAACAACACCG 330859 Query 255009 CTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGC 255068 | |||||||| || || || ||||| || ||| || || ||| || |||| || |||| Sbjct 330860 CCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGC 330919 Query 255069 CGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGC 255128 | |||||||| ||| | | ||| | |||||| ||| || || | || || | Sbjct 330920 CCTGGCACGCTGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACC 330979 Query 255129 TGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGG 255188 | |||||||||| ||| | ||| | ||| | |||||||||||| |||| ||| Sbjct 330980 AGCGCGCCCGCGACCTCTTCTACGCGCTGTGGATCCCAGATCTGTTTATGAGACGTGTGA 331039 Query 255189 AACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTT 255248 || | || | || |||| || ||| ||||||| | || ||||| ||| | | Sbjct 331040 AAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGGTCTCAGCGATTGCT 331099 Query 255249 GGGGTGACGAGTTTGA 255264 ||||| |||||||| Sbjct 331100 ATGGTGAAGAGTTTGA 331115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335267380020