Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000470725.1_202013-09-30] 36 sequences; 32,414,853 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq33 82.4 3e-11 >seq33 Length=1453976 Score = 82.4 bits (90), Expect = 3e-11 Identities = 190/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 55676 GATGTGTGGCTGACCCGCAAGGGCGCGA--TCGACGCGAACGAGGGTGTGCGGGGCCTGA 55733 ||||||||||| || |||||||| || | || |||| | | |||| || | | ||| Sbjct 186374 GATGTGTGGCTTACTCGCAAGGGTGCTACTTCTGCGCGTATG--GGTGAGCTCGCCGTGA 186317 Query 55734 TTCCGGGCTCGATGGGCACCTGTTCGTATGTCGTGACCGGCAAGGGTAATCCCG-AGGCG 55792 ||||||| || ||||| |||| || ||||| |||||||| | ||| | || Sbjct 186316 TTCCGGGGTCCATGGGGGCCTGCAGCTACATCGTGCGAGGCAAGGGAAGCGCCGCAAGC- 186258 Query 55793 TTGTGCTCAGCGCCGCACGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTG 55852 | ||||| |||||||||| || ||||| | | ||| |||||||| || Sbjct 186257 TACTGCTCCTGCTCGCACGGTGCCGGGCGCCGCTACAGCCGCGGCGAGGCGCGCCGGCGA 186198 Query 55853 TTCACGGTCGACGACCTCGAGGCGCGTATGCAGGGCATCGAGTACCGCAAGGGC-GAGGC 55911 ||||| || || | ||||| || | ||||||||||| |||||||| | | || Sbjct 186197 TTCACTGTGTCAGATCATGAGGCTGCTACACTGGGCATCGAGTGCCGCAAGGACAGCAGC 186138 Query 55912 GTGGGTCGACGAGATTCCCGACGCATACAAGCCGATCGA 55950 || | | ||||||| || | ||| |||||| ||||| Sbjct 186137 GT-GTTGGACGAGACACCTGCCGCTTACAAGAACATCGA 186100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193827117138872