Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 206 3e-48 >seq6 Length=517014 Score = 206 bits (228), Expect = 3e-48 Identities = 452/668 (68%), Gaps = 22/668 (3%) Strand=Plus/Minus Query 145686 GGGCTCC-ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGG 145744 |||| || ||||||||| |||||||||| ||||| || ||| ||| | | || |||| Sbjct 382510 GGGCACCGACGTGGTTGCGGTAGACGTGGGCGTCACCAAGGGTGTGCACAAGCTCACCGG 382451 Query 145745 GCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGA 145804 || |||||||| | ||| | | | ||| ||||| | |||| ||| ||||||| Sbjct 382450 GCCGCAGGCCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGA 382391 Query 145805 AGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC---CC 145861 | || || || || |||||||| | |||||||||||||||| |||||| ||||| | Sbjct 382390 AAGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGATAGCTCGCTCG 382331 Query 145862 CGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGC 145917 | ||| ||||||||| || ||| || | |||||| |||||||| ||||| || Sbjct 382330 TGTCCGTGTTCACGTAGAATTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTTTTGC 382272 Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATC 145977 || | |||||||||||| |||| | || | | | | |||||| ||||||| Sbjct 382271 AGCGCGCACGGGTTCCAGGCAGTGAATAGAAGGCGGCGGTCGTTCGGGTTCGCCTTGATC 382212 Query 145978 TCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCC 146037 | | | | | ||||| ||||||||| || | || ||| | | | | || Sbjct 382211 GTCTCCACGATGGACCTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCTTCAAACCCC 382152 Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC----CC 146093 ||| | ||||||||||| | ||||||||| |||||||| || || |||||| || Sbjct 382151 TTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTCCATCTCC 382092 Query 146094 GGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCC 146152 || |||| | |||| ||| | | |||| || || || || |||||| |||||| Sbjct 382091 TTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGCGAGCCGTTGCCGTCCC 382037 Query 146153 AGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGA 146212 |||| | | | || | | | ||| | | || ||| ||| | | |||||| | Sbjct 382036 AGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCCCCGCGCAGGAACCACA 381977 Query 146213 GCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGG---GGAACT 146269 ||||||| ||| || || | ||||||||| | ||| || |||||||| | || | Sbjct 381976 GCAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTCAGCAGCGGCAGGCGGT 381917 Query 146270 GGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGCCCACGCCCGTCC 146329 | | || |||||| | ||| | ||||||| | | |||||||||||| || | Sbjct 381916 TGTCGCGTAGGGAGAAGCGCATCTGTGCGCCGAAGAGGCTGATGGTGCCCACGCCGGTGC 381857 Query 146330 TGTCCCCC 146337 |||| || Sbjct 381856 GGTCCTCC 381849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076534465440