Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6 156 4e-33 >seq6 Length=517014 Score = 156 bits (172), Expect = 4e-33 Identities = 288/418 (69%), Gaps = 16/418 (4%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| | | ||||||||| ||| |||||||||||||| | ||||||||||| || || Sbjct 382511 AGGGCACCGACGTGGTTGCGGTAGACGTGGGCGTCACCAAGGGTGTGCACAAGCTCACCG 382452 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || ||||||||| | | || || || || || || |||||| ||||||||| Sbjct 382451 GGCCGCAGGCCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTG 382392 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCC-- 21102 || ||||| ||||| ||||||||| || | |||||||||| |||||| ||||| | Sbjct 382391 AAAGGGACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGATAGCTCGCTC 382332 Query 21103 ---CCCGAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCG 21158 ||| | |||||| || ||| | | ||| || || || || |||||| Sbjct 382331 GTGTCCGTGTTCACGTAGAATTGAGCAAGCAAGTGGCACGGCGGCAGCGCCATCTTTTGC 382272 Query 21159 AGGTCCGCG---GGGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGT 21213 || |||| |||||||| || | | | ||| || |||| ||| |||| | Sbjct 382271 AG---CGCGCACGGGTTCCAGGCAGTGAATAGAAGGCGGCGGTCGTTCGGGTTCGCC--T 382217 Query 21214 TAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGG 21273 | || ||||| | | | | | |||||||||||| | || |||||||| || || Sbjct 382216 TGATCGTCTCCACGATGGACCTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGCTTCAA 382157 Query 21274 CCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 |||| |||| || ||||| || || | ||||||||| ||||| || || || || || Sbjct 382156 ACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTC 382099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775812313280