Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq28 132 7e-26 >seq28 Length=1168530 Score = 132 bits (146), Expect = 7e-26 Identities = 319/476 (67%), Gaps = 10/476 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||| ||| || ||||| | |||||||| | || || |||||||| ||| Sbjct 330813 CAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCCTGGCACGCTGAC 330872 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAA---AACTCTGGCTTTGAAGAGGCACGAGCCAGG 96992 || |||| |||| | | ||| ||| ||| | || || || || ||| | Sbjct 330873 GTCTTTGGCTTTCT---GCTGCTGAAACGCAACACGGGAAAAGATGACCAGCGCGCCCGC 330929 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 ||| | || || || || ||| | |||||| |||| |||| || || || || || Sbjct 330930 GACCTCTTCTACGCGCTGTGGATCCCAGATCTGTTTATGAGACGTGTGAAAAGCGAGGGG 330989 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | |||| || ||| ||| || ||| || ||||| |||||||| || |||||| Sbjct 330990 AAGTGGACGCTGATGGATCCCAACACGTGCCCGGGTCTCAGCGATTGCTATGGTGAAGAG 331049 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGT-GAGACGAGTCGATGC 97171 |||||| ||| | ||||||| |||||||| ||| |||||| || | || Sbjct 331050 TTTGAGCGGCTCTACGAGCGCTACGAGTCCGAGGGCCGCGGCGTCAAGACGA-TCCAGGC 331108 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | || ||||| || ||| || | ||||| | ||||| ||| |||| | | || Sbjct 331109 CCAGGAGGTGTGGTTTGCTATCCTGGAGTCTCAGATCGAGACGGGAGGGCCGTTCGTCCT 331168 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||| | || |||| ||||| | | ||| ||||| |||||| ||| Sbjct 331169 CTACAAGGACGCATGCAACAGCAAGTCGAACCAGAAGAATCTT-GGCACGATCAAGTGCT 331227 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 | || || |||||||| ||||| |||||| | || || | |||||||| || ||| Sbjct 331228 CGAACCTATGCACGGAGATTGTCGAGTACACGTCGCCACAGGAGACGGCGGTGTGC 331283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058866523360