Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq22 125 7e-24 >seq22 Length=675415 Score = 125 bits (138), Expect = 7e-24 Identities = 216/309 (70%), Gaps = 10/309 (3%) Strand=Plus/Plus Query 133206 GTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTG 133265 ||||||||| | || || ||||| || |||||||| ||||| ||| || Sbjct 514542 GTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTCACGTCGCT 514601 Query 133266 AGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAG 133325 ||| |||| | ||||| ||| |||| |||||||||||| ||||||| ||||| || Sbjct 514602 CATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAGAAGGCAAG 514661 Query 133326 CACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT-CCCAGTCGCGCGTGTCCT 133384 ||||||||||||||| || ||||| ||||||| ||| | ||||||| | |||| | Sbjct 514662 CACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTC-AGCATTGCCCAGTCCTTCATGTCGT 514720 Query 133385 TGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC--CTCGGCT--TTTTTGTACATA 133440 || |||||| | |||||| || ||||| || || ||| || | |||||| | Sbjct 514721 TGCCCAGGTCGATCTCCTCCACCGTCCA----GATGCAGCTCTCCTGCTCCTTGTACTTG 514776 Query 133441 CTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAAC 133500 | ||| ||||| || || || || || | || | ||| | ||||| || || | Sbjct 514777 CGCCAGATGTCATGGTACTGGATTGGGAAGAGGACGTAGCGGAGCGGGTTCTCCTGCTGC 514836 Query 133501 AGCGGCTCC 133509 ||||||||| Sbjct 514837 AGCGGCTCC 514845 Score = 95.1 bits (104), Expect = 1e-14 Identities = 188/270 (70%), Gaps = 10/270 (4%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||||||| || || || || |||||||| ||||| || || || ||||| |||| Sbjct 513020 CATCACGCCAGCCTTCTGGTACTCCCCCACCTTCTTCTCGAAGAAGTTCGTTTTGCCCTG 513079 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCC 132707 || || || | | ||| || || || || | | | | ||||||||| ||| Sbjct 513080 CAGCGAGATCATCTCCATGAAGTCGAACGGCTGCGTCGAGCGGTAGTGCTTCTCCTCGCC 513139 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT-GGTTTCGC 132766 || | | | || ||||||| ||| || |||||||||||||| |||| ||| | | ||| Sbjct 513140 GAGC--GAC-ACCAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATCAGCTCCGC 513196 Query 132767 AATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCG 132825 || | || | ||| |||||||||||||| ||| || ||| || |||||||| Sbjct 513197 -GTTCATGCCAATCAGCCGCACCGGCAGCGCGTCGCAGATGAACTCG-CGCTCGATGTTC 513254 Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGC 132855 ||||| || || ||| ||| |||||| Sbjct 513255 ACCGCATCCACGATGATCTCCAGCACGCGC 513284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172574922240