Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq28 107 6e-18 seq20 84.2 6e-11 >seq28 Length=1168530 Score = 107 bits (118), Expect = 6e-18 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| || || || |||| || |||||||| Sbjct 331297 ATGGAGGCGAGGTTGCACACCGCCGTCTCCTGTGGCGACG-TGTACTCGACAATCTCCGT 331239 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||| ||||| | |||||||||||| || || ||||| || || Sbjct 331238 GCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGC 331179 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 |||||||| || | | | || ||| ||||| ||||| | ||||| || Sbjct 331178 GTCCTTGTAGAGGACGAACGGCCCTCCCGTCTCGATCTGAGACTCCAGGAT 331128 >seq20 Length=750899 Score = 84.2 bits (92), Expect = 6e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 251496 AATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTC 251555 || ||| || || ||||||||||| || | || || |||||| ||||| || ||||| Sbjct 996 AACCATGCAGTCGCGCTCCATTTCTCCAACGCGGAGGCCACCACTGCGAGACCGGCCCTC 1055 Query 251556 GGCAGGCTGACGAGTGAG-ATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCAT 251614 || ||||| |||||||| || ||| ||| ||| | ||||| || ||| || Sbjct 1056 GGTTGGCTGGCGAGTGAGCATCGACC-GAGGCCCGGTCGAGCGAGCGTGCATCTTGTCTG 1114 Query 251615 TTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 | ||||| |||||||| ||||||||| | ||| || | ||||| Sbjct 1115 TGACCATGTGCTTGAGGCGCTGGTAGTAGATGGGCCCAAAGAAGA 1159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816921124132