Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq28 96.9 3e-15 >seq28 Length=1168530 Score = 96.9 bits (106), Expect = 3e-15 Identities = 190/277 (69%), Gaps = 7/277 (3%) Strand=Plus/Minus Query 139360 CACTTGTCAGGACACATGAGCGACCA-TACGCCGTTCGCCTTG-ACGCGCCTCATGAACA 139417 ||| ||| ||| ||| |||| ||| | | || |||| || || || ||||| |||| Sbjct 331018 CACGTGTTGGGATCCATCAGCGTCCACTTCCCC--TCGCTTTTCACACGTCTCATAAACA 330961 Query 139418 GATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGT 139477 |||| || ||||||| ||| | | | ||||| || || || || ||| ||| Sbjct 330960 GATCTGGGATCCACAGCGCGTAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGT 330901 Query 139478 TACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCA 139537 | ||||||| || || |||| |||||||||||||| || || ||||||| ||| | Sbjct 330900 TGCGTTTCAGCAGCAGAAAGCCAAAGACGTCAGCGTGCCAGGGCTCGAGATAGACGGCGA 330841 Query 139538 TTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGC 139594 ||||| || || || ||| || || || |||| || | | || ||||| |||| Sbjct 330840 AGGCGCCCTTGCGCTTACCGCCGCCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGC 330781 Query 139595 GCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 | | ||| ||| | || ||| ||| || ||||| || Sbjct 330780 GTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTCGT 330744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897397546080