Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq28 89.7 5e-13 >seq28 Length=1168530 Score = 89.7 bits (98), Expect = 5e-13 Identities = 217/323 (67%), Gaps = 7/323 (2%) Strand=Plus/Minus Query 151718 TGCCACGGTTCAACGTACACTGCTTGGGCGCCTTTTCGCTT---GCCACCTTGATCCACG 151774 ||||| || || | || || || |||||| || ||||| ||| || || |||||| Sbjct 330865 TGCCAGGGCTCGAGATAGACGGCGAAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCCACG 330806 Query 151775 TGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTC 151834 | || | | || || || || || |||||||| | || ||| | | ||||||||| Sbjct 330805 TAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTC 330746 Query 151835 GTAGATTTTATTTTGCTG-TTGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCC 151893 ||| ||| | |||| || | |||| | | ||| ||||| || ||||| ||||| Sbjct 330745 GTACCAGCTATGTAGCTGCCCGCCG-CGCGGATGTTGTGCACGTGCAGACCAATGCCGCC 330687 Query 151894 GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATC 151953 | | ||| ||||| ||| || || || | |||| ||||||||| ||||| || Sbjct 330686 GGCCGCTTTGCTGATCACGGCACACTCCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTC 330627 Query 151954 -GCTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGTGTCAGAGTGCCGGCAGCGA 152012 | ||| | | || || || || || ||||| ||||| || | |||||||| | Sbjct 330626 TTCCTTCGA-CGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGGCGTTAA 330568 Query 152013 ACATGGTTGGGCTTGCGTGCGTG 152035 | | ||| ||| | ||||| ||| Sbjct 330567 AGAGGGTCGGGGTGGCGTGGGTG 330545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543780155200