Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989975.1_202017-02-07] 36 sequences; 32,196,393 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq22 125 7e-24 >seq22 Length=658755 Score = 125 bits (138), Expect = 7e-24 Identities = 216/309 (70%), Gaps = 10/309 (3%) Strand=Plus/Plus Query 133206 GTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTG 133265 ||||||||| | || || ||||| || |||||||| ||||| ||| || Sbjct 497890 GTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCTTCACGTCGCT 497949 Query 133266 AGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAG 133325 ||| |||| | ||||| ||| |||| |||||||||||| ||||||| ||||| || Sbjct 497950 CATGAAGCGCTGCGCAAGATTCTCGATGACTATGCCGTCGCTGCCGGCGAAGAAGGCAAG 498009 Query 133326 CACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT-CCCAGTCGCGCGTGTCCT 133384 ||||||||||||||| || ||||| ||||||| ||| | ||||||| | |||| | Sbjct 498010 CACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTC-AGCATTGCCCAGTCCTTCATGTCGT 498068 Query 133385 TGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC--CTCGGCT--TTTTTGTACATA 133440 || |||||| | |||||| || ||||| || || ||| || | |||||| | Sbjct 498069 TGCCCAGGTCGATCTCCTCCACCGTCCA----GATGCAGCTCTCCTGCTCCTTGTACTTG 498124 Query 133441 CTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAAC 133500 | ||| ||||| || || || || || | || | ||| | ||||| || || | Sbjct 498125 CGCCAGATGTCATGGTACTGGATTGGGAAGAGGACGTAGCGGAGCGGGTTCTCCTGCTGC 498184 Query 133501 AGCGGCTCC 133509 ||||||||| Sbjct 498185 AGCGGCTCC 498193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172574922240