Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989975.1_202017-02-07] 36 sequences; 32,196,393 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq26 163 4e-35 seq28 82.4 1e-10 >seq26 Length=1058081 Score = 163 bits (180), Expect = 4e-35 Identities = 461/699 (66%), Gaps = 17/699 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || || || | ||| || || ||||||||||| || || || || | || Sbjct 411590 TCGAAGTCCTCGCCCCCAAGGTGCGTGTCGCCCGCGGTCGCCTTCACCTCGAACACGCCG 411531 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | |||| || ||||| ||||| || || || ||||| || ||||| ||| Sbjct 411530 GACTCGATCGTCAACAGCGTCACATCGAACGTGCCGCCGCCAAGGTCGAAGATGAGCACG 411471 Query 7577 TTCGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | || | |||| || || | |||||||||||||| || || || || Sbjct 411470 TTCTTCTCTCCCTTGTCTCCCTTGCGGTCCATGCCGTACGCGATAGCGGCGGCGGTGGGC 411411 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| |||||||| || | | || || |||||||| || Sbjct 411410 TCGTTGATGATGCGCAGCACGTTGAGGCCAGCGATGGAGCCGGCGTCCTTCGTCGCCTGG 411351 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || |||| ||||| ||||| |||||| ||| ||||| |||| | || || | || Sbjct 411350 CGCTGCGCGTCGTTGAAGTACGCCGGGCACGTCACGACGGCGTTGCTCACCTTGTGCCCC 411291 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || | ||||| | || ||||| || || ||||| | || ||||| || | Sbjct 411290 AGGAAGTTCTCCGCCGTCTCCTTCATCTTCTGCAGCACCATAGCCGAGATCTCCTCTG-G 411232 Query 7814 GCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 | ||| || || | | | | || || || | || || ||| | Sbjct 411231 GAAAAAGGTCTTGGACTGGTTCTGGTACTCGACGCTGATGACCGGCTT-GCCG--TCCTT 411175 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATAT-CGTCT--TGGACCTGTTGGTCCGAAAA 7929 | | | ||||| | | ||| | ||||| | || || || | | | ||| || Sbjct 411174 GACGGTCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGAAGGTCAGGATCGTC---GAA 411118 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 ||| | ||||| | ||||| || ||||| || ||||| | ||||||||||| || Sbjct 411117 CTTGCGGCCGATCATGCGCTTCGCGTCAAACACGGTGTTGCTCGGGTTCATGGCCACCTG 411058 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||||||| || || ||||| || || || | || || || || || || || || Sbjct 411057 GTTCTTCGCGGCATCGCCGATCAGGCGCTC---TGTCTCGGTGAAGGCCACATAGGACGG 411001 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 ||||| || || || |||||||| |||||||| || || | ||||| | ||||||| Sbjct 411000 TGTCGTGCGGTTACCCTGGTCGTTGGCAATAATGTCCACCTGCTCGTTCTTGAAGACGCC 410941 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||||| ||||| || || | || || ||||| || Sbjct 410940 CACGCACGAGTACGTCGTGCCCAGGTCGATGCCGATGGC 410902 >seq28 Length=1168597 Score = 82.4 bits (90), Expect = 1e-10 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 ||||||||||| || || || || || || || | |||||||||||| |||||||| Sbjct 1101424 GCCGCCGCCGTCGGCTCGTTGATGATGCGCAGCACCTCCAGGCCAGCAATCGTTGCCGCC 1101483 Query 7679 TCTTTCGT-CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 | || || |||| | || |||| |||||| ||||| ||||| ||||| || || || | Sbjct 1101484 GCCTTGGTACGCTCG-CGCTGCGCATCGTTGAAGTACGCCGGCACCGTCACCACGGCCTT 1101542 Query 7738 CGTGACTTTCTTACCGAGATAC 7759 | | || | ||| || || ||| Sbjct 1101543 CTTCACCTGCTTGCCCAGGTAC 1101564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132514190240