Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq30 100 2e-16 seq21 91.5 1e-13 >seq30 Length=2596710 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||| | || ||||| || || |||||||| || Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||| ||||| || || ||| |||| || |||||||| || || || Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| |||||| | ||| ||| Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | | | ||| |||||||| || || || || || ||||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATG 1328931 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || ||||| || || |||||||| || | ||||| || Sbjct 1329132 CAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 1329191 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| |||| || |||||||| || || || |||||||||||||| Sbjct 1329192 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 1329251 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| |||||| | ||| ||||| | | | ||| Sbjct 1329252 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAGCGCGATCGT 1329311 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||||||| || || || || || ||||||||| || Sbjct 1329312 CTTGCCGGTGAGCGTCTTCACGAAGATCTGCATGACT 1329348 >seq21 Length=1153175 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133210 TGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACAT 133269 ||||||| || | ||||||||| | ||||||||| || || || | | ||| | | Sbjct 326294 TGACGAGGTATTTGTTGACCACAGGGAACTCGCCGCTCAGCACACGCCGAACATAAATGT 326235 Query 133270 TCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGG 133329 | || ||||| || ||||| | |||||||||||||| ||||||| || | ||| || | Sbjct 326234 TTGAGGTGAAAGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTG 326175 Query 133330 GCATGTACGCCACCAACAAAGAGTT 133354 ||||| ||| |||| || ||||| Sbjct 326174 GCATGGGCGCAACCAGTAATGAGTT 326150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827782782540