Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30]
495 sequences; 30,761,861 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq30 138 7e-28
>seq30
Length=2596710
Score = 138 bits (152), Expect = 7e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||||||||| | |||||||||||| | || || ||||| ||||||||||| |
Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
||| ||| | || |||| ||||||||| ||||| || || |||||||||| || ||||
Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | | | || | ||| ||| || ||
Sbjct 1328824 -ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCAC 1328882
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||| || ||||||||||| || ||||| |||||||||||
Sbjct 1328883 CTCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1328930
Score = 127 bits (140), Expect = 1e-24
Identities = 163/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 34169 CGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGA 34228
||||| | |||||||||||| | || || ||||| ||||||||||| | |||
Sbjct 1329124 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTG 1329183
Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCT 34287
||| | || |||| ||||||||| ||||| || || |||||||||| || |||| | ||
Sbjct 1329184 CGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG-ATGCC 1329242
Query 34288 CTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCAC 34347
||||||||| ||||| ||| | | | || | ||| ||| || || ||||
Sbjct 1329243 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAG 1329302
Query 34348 CGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||| || ||||||||||| || ||||| |||||||||||
Sbjct 1329303 CGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1329344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070050967200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |