Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq30 138 7e-28 >seq30 Length=2596710 Score = 138 bits (152), Expect = 7e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | |||||||||||| | || || ||||| ||||||||||| | Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 ||| ||| | || |||| ||||||||| ||||| || || |||||||||| || |||| Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | || | ||| ||| || || Sbjct 1328824 -ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCAC 1328882 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||| || ||||||||||| || ||||| ||||||||||| Sbjct 1328883 CTCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1328930 Score = 127 bits (140), Expect = 1e-24 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 34169 CGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGA 34228 ||||| | |||||||||||| | || || ||||| ||||||||||| | ||| Sbjct 1329124 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTG 1329183 Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCT 34287 ||| | || |||| ||||||||| ||||| || || |||||||||| || |||| | || Sbjct 1329184 CGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG-ATGCC 1329242 Query 34288 CTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCAC 34347 ||||||||| ||||| ||| | | | || | ||| ||| || || |||| Sbjct 1329243 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAG 1329302 Query 34348 CGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||| || ||||||||||| || ||||| ||||||||||| Sbjct 1329303 CGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1329344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070050967200