Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq33 156 4e-33 >seq33 Length=501070 Score = 156 bits (172), Expect = 4e-33 Identities = 290/418 (69%), Gaps = 16/418 (4%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| ||| ||||||||| ||| || |||||||| || | ||||||||||| || || Sbjct 366047 AGGGCATCGACGTGGTTGCGGTAGACATGGGCGTCGCCGAGGGTGTGCACAAGCTCACCA 365988 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || ||||||||| | | || || || || || || |||||| ||||||||| Sbjct 365987 GGCCGCAGGCCCGTCGCCTTTGCAATAAGGATGGTGAGTAGCGCGTAGGAGGCGATGTTG 365928 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC---- 21100 || ||||| ||||| ||||| ||| || | |||||||| | |||||||||||| Sbjct 365927 AAGGGGACGCCGAGACCCATATCGCACGAGCGCTGGTACACCATGCAGGACAGCTCCTTT 365868 Query 21101 -CCCCCGAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGC 21157 | ||| | |||||| |||||| | | |||||| || || || |||||| || | Sbjct 365867 GCGTCCGTGTTCACGTAGAACTGAGCAAGCAAGTGACACGGTGGCAGCGCCATCTTGCTC 365808 Query 21158 -GAGGTCCGC-GGGGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGT 21213 ||| ||| |||||||| || | | || ||| ||||||| ||| ||| | | Sbjct 365807 AGAG---CGCACGGGTTCCAGGCAGTGAAGAGGAGGCGGCGATCGTTCGGGTCCGAC--T 365753 Query 21214 TAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGG 21273 | || ||||| | | | |||||||||||||| || | ||| | || ||| Sbjct 365752 TGATGGTCTCCACGATGGCCTTGATCTGGTCCACCCCCTCGCCATTGTAATCCGCCTCGA 365693 Query 21274 CCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 || ||||||| ||||| || || | ||||||||| ||||| || || || ||||| Sbjct 365692 AGCCTTTGTACTCGGCCCCGAAGTGACGCCACTGGAAGCCGTAGACAGGACCGAGATC 365635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773419307600