Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq21 156 6e-33 seq15 149 9e-31 >seq21 Length=1153175 Score = 156 bits (172), Expect = 6e-33 Identities = 327/477 (69%), Gaps = 14/477 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||| || || ||||| | ||||||||| | || || |||||||| ||| Sbjct 325220 CAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACGCCGAC 325279 Query 96936 GTTTTTGACTTTATCGAGATG---CGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGG 96992 || |||| |||| | | || ||||| | | ||| || || ||| || | Sbjct 325280 GTCTTTGGCTTTTTGCTGCTGAAGCGCAACA---CGGGCAAAGATGACCAACGCGCTCGC 325336 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 ||| | || ||||| || ||||| |||||||||||||||||||| || || || || Sbjct 325337 GACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGAAGCGTGTAAAGAGCGAGGGG 325396 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | |||| || ||| |||| || ||| || || || ||| |||| || |||||| Sbjct 325397 AAGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCAGCGACTGCTATGGTGAAGAG 325456 Query 97113 TTTGAGGCCAAGTACACG-GC-CTACGAGCAAGAGGGCCGATACGTG-AGACGAGTCGAT 97169 || ||| | | | ||| || ||||||| |||||||| |||| |||||| || | Sbjct 325457 TTCGAG--CGACTCTACGAGCGCTACGAGGCGGAGGGCCGCGGCGTGAAGACGATTC-AG 325513 Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 || | || ||||| |||||| || | | ||| | ||||| || |||| ||| Sbjct 325514 GCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTTCATC 325573 Query 97230 CTCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288 | |||||||| |||| || |||| ||||| || | || || |||||| | Sbjct 325574 TTGTACAAGGA-CGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGGTACGATCAAGTG 325632 Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 ||| ||| ||||||| || ||||| |||||| | || ||||| |||||||| || || Sbjct 325633 CTCGAATTTGTGCACCGAGATTGTGGAGTACACGTCGCCGGAGGAGACGGCCGTGTG 325689 >seq15 Length=633270 Score = 149 bits (164), Expect = 9e-31 Identities = 584/899 (65%), Gaps = 56/899 (6%) Strand=Plus/Minus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGC---CTC 125050 ||| || ||||| |||||||||||| ||| | |||||| || |||| || Sbjct 479872 CCTCTTCCCCATTCAGTATCATGACATCTGGCGCAAGTACAAGGAG---CAGGAAAGCTG 479816 Query 125051 CTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTT 125110 | | |||||||| || ||| |||| || ||| ||| || | || |||| | | | | Sbjct 479815 CATCTGGACGGTGGAGGAGATCGACCTCGGCAACGACATGAAAGACTGGGTGGCAC--TG 479758 Query 125111 GACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGG 125170 ||| || ||||| | || || |||| | | |||||||| ||||| ||| || Sbjct 479757 GAC-GACGGGGAGCGGCACTTCATCAAGCACGTGCTTGCCTTCTTCGCCGGGAGCGACGG 479699 Query 125171 AATCGTCAACGACAATCTGTTGACACGATTCTCTCAA-GAGTTGACCATTCCAGAGGTGT 125229 || ||| ||| || || | || || | | | || ||| | ||||||| | Sbjct 479698 CATTGTCGTCGAGAACCTTGCGCAGCGTTT-TATGAGTGATGTGAAGGTGCCAGAGGCG- 479641 Query 125230 CGTGCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACA 125288 || || || ||||| ||||| | ||||| |||||| | |||||||| | |||||| | Sbjct 479640 CGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTA 479581 Query 125289 CTGATTGACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGA 125347 ||| | |||| |||||| || | || | | || | ||| | |||| ||| | Sbjct 479580 CTGCTGGACACGTACATCACAGA-CAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATCCA 479522 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCG--ATGACGAC 125405 ||| | |||| || || ||||| | |||| | |||||||||| | | | Sbjct 479521 GACGATCCCGTGCATCAAGAAGAAGGCAGAGTGGGCCGTACGGTGGATCGGGAGCAGCGC 479462 Query 125406 AAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCG 125465 || |||| || | ||| | | || ||||| || |||||||||||||||||| Sbjct 479461 GAG-CTTCCAG----GAGCGGCTGATCGGGTTTGCCGCGGTGGAGGGCATCTTCTTTTCG 479407 Query 125466 GG-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCA 125524 || | || |||| | | || ||||| ||||||||||| || ||||| || || ||| Sbjct 479406 GGCTCATTCTGCGCGC-TGTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTAACGTT 479348 Query 125525 CAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT- 125583 || |||||| | || || || ||||||||||||||| ||||| || || ||| Sbjct 479347 TAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGCGTGCCTCTTGTA 479288 Query 125584 ---TTCGCA--------ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCAT 125632 ||||| || | |||| || |||| || | | || || |||| Sbjct 479287 CAACTCGCACATCAGGCACAAGCTGCCTCGCGAGCGC-------GTGCTG--GAGATCAT 479237 Query 125633 CAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT 125692 | || || || |||| || || | ||||| | ||| | || ||||| Sbjct 479236 C------GT---GGACGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGT 479186 Query 125693 CAGCATGATTGGCATGAACTGCAAGCTAATGTGCG-AGTACATAGAGTTTGTGGCAGATC 125751 | ||||||||||||||| || | ||| ||| ||||||| ||||| ||||| |||| Sbjct 479185 GCGACTGATTGGCATGAACTCGGAGTTGATG-GCGCAGTACATCGAGTTCGTGGCGGATC 479127 Query 125752 GTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCA 125811 | || || | | | || ||| |||||||| | | | || || || || | Sbjct 479126 GACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTACAACGCGACGCAGCCATTCGACTTTA 479067 Query 125812 TGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 || | || || || |||||||||| ||||| |||||||||||||| |||||||| Sbjct 479066 TGGAGATGATCTCGCTGCAGGGTAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTAC 479008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054614696200