Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21 224 3e-53 >seq21 Length=1153175 Score = 224 bits (248), Expect = 3e-53 Identities = 597/889 (67%), Gaps = 40/889 (4%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || || || ||||| ||||| |||||||| || | || || || ||| |||| Sbjct 324845 ATTGTAGAGCGTCCACAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGAT 324904 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGC 363557 | || || | ||| ||||| |||| || ||| | | | ||||| ||||| Sbjct 324905 CTCGAGAACGTGCGTGAGACATACGAGCTGATGTCGAAGGGTT----TCTTCACCCACGC 324960 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 ||| || || | | ||| || || || | || || || ||| || ||||| || | Sbjct 324961 CACACCGACCCTCTTCAACGCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGT 325020 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 ||||||||| ||| || || |||| ||||| || ||| | || || | || Sbjct 325021 GGCGTCGAAGGACGACAGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGAT 325080 Query 363678 TTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCA-CAGAACAG 363734 |||| || ||||| || || || | || | ||||| | || || | | | || Sbjct 325081 CAGCAAGGCGGCTGGCGGCATCGGCCTGCA-CG-TGCACAACATCCGCGCCGCTGGA-AG 325137 Query 363735 TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 |||||| ||| || || ||||| ||||| || || ||||| || || || | Sbjct 325138 CTACATTGCCGGAACCAATGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAA 325197 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 ||| ||||| | ||||| |||||||| || || |||||||| || || || || | || Sbjct 325198 CAACACTGCCCGCTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTA 325257 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA---AACACGGG 363911 || ||||| || ||||| | |||| ||| | ||| | ||| |||||||| Sbjct 325258 CCTTGAGCCATGGCACGCCGACGTCTTTGGCTTTTT---GCTGCTGAAGCGCAACACGGG 325314 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 ||||| || || || || || || |||||||| || ||||| | || || || Sbjct 325315 CAAAGATGACCAACGCGCTCGCGACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCAT 325374 Query 363972 GAAGCGCGTGGAG-GC-AGGTAAGAATTGGTCACTCTTTTGCCC--ACACGAATGTCCAG 364027 |||||| || || || ||| ||| ||| | || | ||| ||||| || || | Sbjct 325375 GAAGCGTGTAAAGAGCGAGGG--GAAGTGGACGCTGATGGACCCCAACACG--TGCCCGG 325430 Query 364028 GTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 | || ||| || ||||| ||| || | | || ||||| || || |||| Sbjct 325431 GCCTCAGCGACTGCTATGG--TGAAGAGTTCGAGCGACTCTACGAGCGCTACGAGGCGGA 325488 Query 364086 GGGAAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 ||| | ||| ||||| |||| || ||| || | |||||||||||| |||| |||| Sbjct 325489 GGGCCGCGG-CGTGAAGACGATTCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGC 325547 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 |||| ||||| || || | || |||||||| || |||||||| ||||||| |||| Sbjct 325548 AGATCGAGACGGGCGGGCCGTTCATCTTGTACAAGGACGCGTGCAACAGCAAGTCAAACC 325607 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACA 364261 || || |||| ||||| | ||| || || || | || ||||||||| | || |||| Sbjct 325608 AGAAGAACCTCGGTACGA-TCA--AGTGCTCGAATTTGTGCACCGAGATTGTGGAGTACA 325664 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310 | | || || ||||| ||||| ||||||||||| || |||||||| || Sbjct 325665 CGTCGCCGGAGGAGACGGCCGTGTGTAACCTTGCCTCTATCGCGCTGCC 325713 Score = 87.8 bits (96), Expect = 5e-12 Identities = 273/414 (66%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 ||||||||||| || || || || | ||||| ||||| ||||||||||||||||| || Sbjct 326165 GCGCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAACGAGTGCTTCGAGCCT 326224 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 || || || ||||| || || || || ||| || || || || || || || Sbjct 326225 TTCACCTCAAACATTTATGTTCGGCGTGTGCTGAGCGGCGAGTTCCCTGTGGTCAACAAA 326284 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACTATAT 364928 ||||| |||| ||| || || || ||||||||| || ||| ||| ||| | || Sbjct 326285 TACCTCGTCATGGACCTCATCGCGCGTGGGCTGTGGAACGAGCAG-ATGCGCAACGAGAT 326343 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATT-CCAGGATTTCCAGAAGATCTGAAGCCTA 364987 ||| || | ||| || | | | |||| || | |||| | || |||| | Sbjct 326344 TATCTCCTACAGTGGCTCAATCCTCAGCATTGACAACA-TTCCGGCCGAGCTGAGGGAGC 326402 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 | || ||||| ||||| ||| | ||| | || || |||||||| || |||| Sbjct 326403 TGTATCGGACCGTGTGGGAGATTCCACAGCGCAAGCTGATCGATATGGCACGTGACCGCG 326462 Query 365048 G----TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG-CCAACCTC 365102 | | | || | | ||| || ||| | ||| | ||| || | || || ||||| Sbjct 326463 GACAATACATTGACCAGTC----GCAATCGCTAAACCTCTTCCTG-CAGAGCCCCACCTC 326517 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | | || | |||||||||| |||||| | ||| | || || || |||||||| Sbjct 326518 TGGCCAGATCACATCCATGCTCTTCTACTGCTGGGAGTCTGGGCTGAAGACAGG 326571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345333887090