Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq21 358 6e-94 seq15 174 1e-38 seq30 105 6e-18 >seq21 Length=1153175 Score = 358 bits (396), Expect = 6e-94 Identities = 905/1351 (67%), Gaps = 49/1351 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| || | ||||||||| || |||||| || | ||| | ||| || ||||| || Sbjct 326280 TTGACCACAGGGAACTCGCCGCTCAGCACACGCCGAACATAAATGTTTGAGGTGAAAGGC 326221 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||| || || || | ||| | ||||| |||||| ||| ||| Sbjct 326220 TCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGCGCAACC 326161 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | |||||| ||||||| |||| || | | | | ||||| || | |||| ||||| Sbjct 326160 AGTAATGAGTTGCGCATGCCGACCTGCCTCACCTTCTCCTTGAGGCTGGCCCAGTCCCA- 326102 Query 145238 AGCGAAG-----TCGGCCTCACGTCC---CACATGTCGTACTGCAAAATGCCCTCGCTGG 145289 |||| |||| | | ||| | |||||||| |||| | |||||||||||||| Sbjct 326101 -GCGACCACTGTTCGGTCGCGCGTTCTTCCACATGTCAAACTGGAGAATGCCCTCGCTGG 326043 Query 145290 CGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT-CGCC 145348 | |||||||| | |||| ||| |||| | || ||||| || | || | Sbjct 326042 CCGGGCTGCCGTTGAAGGTCTCGTACGGGCCCTCCTCCCTCGCCAGCTC-CATCGACGAC 325984 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408 || | || |||| || || |||||| || | ||| | | || ||| || || Sbjct 325983 TCGACCGCCGCGAAGTAGATGGTCTCGAAGATCTCTGCGTTTAACCGCTGCGCCTC--CG 325926 Query 145409 CTCT--CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGC 145466 || | |||||| |||| || | |||| || || || ||||| | || | || Sbjct 325925 CTGAGACAAACGGCAGCCGCATGAGGATGAAAGTGTCCGCAAGACCCTGCACACCAAGGC 325866 Query 145467 CGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGT 145526 ||| ||| || | ||||||||| | ||||| ||| | ||| || || |||| Sbjct 325865 CGACGGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGTCTCCACAGGGTAGTAGTTGCGGT 325806 Query 145527 CGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTTCAA 145583 | |||| ||||| || ||| | |||||| | ||| | | || | Sbjct 325805 CAATAACCCGATTCAGATTGCGCGTGATCTGCTTTGTCACGGTGTAGAGAAGCTGGTG-- 325748 Query 145584 AGTCAAAC-CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTA 145642 || ||| || || || || | | | || ||| | | ||||| || || | ||| Sbjct 325747 -GTTGAACTCGCGCTTC-TCGATGTCGACGAAGCGAGGCAGCGCGATAGAGGCAAGGTTA 325690 Query 145643 CAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACA 145701 || || ||||||||||| |||| || |||| | || ||||||| ||||||||| || Sbjct 325689 CACACGGCCGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGTGCACAAATTCGAGCA 325631 Query 145702 TTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCAT 145761 ||||| || || || || | ||| || || |||||||||||||||||||| | || Sbjct 325630 CTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTGTTGCACGCGTCCTTGTACAAGAT 325571 Query 145762 GTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGCA 145819 | |||| ||||| ||||| | ||||| ||||| ||| |||| || |||||||| Sbjct 325570 GAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAAC--CACACCTCCTGCGCC 325513 Query 145820 CGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCG 145879 | | | || | | ||||||||| | ||||| | |||||| ||| ||| | Sbjct 325512 TGAATCGTCTTCACGCCGCGGCCCTCCGCCTCGTAGCGCTCGTAGAGTCGCTCGAACTCT 325453 Query 145880 GAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCG 145939 ||| ||||| ||| ||||| || ||| ||||||| |||||||| ||| || Sbjct 325452 TCACCATAGCAGTCGCTGAGGCCCGGGCACGTGTTGGGGTCCATCAGCGTCCACTTCCCC 325393 Query 145940 TTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC-- 145997 | | || || |||| ||| ||||||||||| ||||||||||| || | | ||||| Sbjct 325392 TCGCTCTTTACACGCTTCATGAACAAATCTGGGACCCACAGCGCATAGAAGAGGTCGCGA 325333 Query 145998 GCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACA---CTATAGATGT 146054 |||| ||| || || ||| |||| ||||||| |||| | | | ||| || Sbjct 325332 GCGCGTTG--GTCATCTTTGCCCGTGTTGCGCTTCA---GCAGCAAAAAGCCAAAGACGT 325278 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGT 146111 | |||||||| || |||| |||||||||| ||| || || || || ||| ||||||| Sbjct 325277 CGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGT 325218 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171 |||||| || | ||||||| |||||||||| ||| ||| ||| ||| | | || Sbjct 325217 CCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGCCCGTTCGACGTGC 325158 Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231 | || || | || | | || || ||| | | || || | || ||||| | Sbjct 325157 CATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACGTGCAGGCCGATGC 325098 Query 146232 CGCC-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 |||| |||| |||| || ||||||| || ||||| |||||||||||||||||| Sbjct 325097 CGCCAGCCG-CCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCAATG 325039 Query 146291 CTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 || ||| ||||| | ||| | ||| |||||||||| ||| |||| | | || || || | Sbjct 325038 CTGTCGTCCTTCG-ACGCC-ACCAGGAAGCACGAGCTCATTTGCGGCTTTGGGGTGCCGG 324981 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAA 146379 | ||| | ||||| | ||||| || || Sbjct 324980 CGTTGAAGAGGGTCGGTGTGGCGTGGGTGAA 324950 >seq15 Length=633270 Score = 174 bits (192), Expect = 1e-38 Identities = 324/465 (70%), Gaps = 8/465 (2%) Strand=Plus/Minus Query 46135 AGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttt 46194 |||| ||||| ||| ||||| || | | ||||| ||||||||| |||| ||| Sbjct 479469 AGCAGCGCGAGCTTCCAGGAGCGGCTGATCGGGTTTGCCGCGGTGGAGGGCATCTTCTTT 479410 Query 46195 tCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACG 46254 || ||| || ||| | || | | || | ||| | ||||| || || ||| Sbjct 479409 TCGGGCTCATTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTAACG 479350 Query 46255 TTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTAC 46314 |||||||||||||| || ||||||||||||||||| || |||||||| ||||| |||| Sbjct 479349 TTTAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGCGTGCCTCTTG 479290 Query 46315 TATAACACTCGCGTGCACG-ACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGA 46373 || ||| | | | | || | ||||||| | | ||| ||||||| || || ||| Sbjct 479289 TACAACTCGCACAT-CAGGCACAAGCTGCCTCGCGAGCGCGTGCTGGAGATCATCGTGGA 479231 Query 46374 GGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC-CTGCTGGGCA 46432 |||||| ||| ||| ||||| | | ||| ||||| | ||| ||| | |||| Sbjct 479230 CGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGG-TGCGACTGATTGGCA 479172 Query 46433 TGAACGCACAGTCAATGTGCG-ACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAG 46491 ||||| | ||| ||| ||| | ||||||||||| || ||||| ||||||||||| | Sbjct 479171 TGAACTCGGAGTTGATG-GCGCAGTACATCGAGTTCGTGGCGGATCGACTGCTCGTCTCG 479113 Query 46492 CTTCACCAGCCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTC 46550 || || |||||| | ||||| ||| | ||||| || |||||| | | ||||| Sbjct 479112 CTCGGTGAGGAGAAGCACTACAACGCGACGC-AGCCATTCGACTTTATGGAGATGATCTC 479054 Query 46551 CCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| |||| || || || || ||||| ||| || |||||||| Sbjct 479053 GCTGCAGGGTAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTA 479009 >seq30 Length=2596710 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||| |||||||| | || | || |||||||| || |||||||| || Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||||| ||| Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || ||| | | ||| | Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | | | || || ||||| || || || ||||| ||||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATG 1328931 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 131014 CGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTG 131073 |||| |||||||| | || | || |||||||| || |||||||| || | ||| Sbjct 1329124 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTG 1329183 Query 131074 CGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCT 131133 || ||||| ||||||||||| ||| |||| | |||||||||||||| ||||| || Sbjct 1329184 CGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCC 1329243 Query 131134 TCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACG 131193 || ||||| ||| || ||| | | ||| | || ||| | | ||| | || | Sbjct 1329244 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAGC 1329303 Query 131194 GTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 | | || || ||||| || || || ||||| |||||||||||| Sbjct 1329304 GCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATGACT 1329348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009879420800