Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq30 113 4e-20 >seq30 Length=2596710 Score = 113 bits (124), Expect = 4e-20 Identities = 169/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 16700 CGCATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTG 16759 ||||| ||| || || || | ||| |||| ||||||||||||||||| || |||||| Sbjct 1328695 CGCATCCTCCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTG 1328754 Query 16760 TAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819 ||||| || | || | | ||||||| || ||||| || | || || ||||| ||| Sbjct 1328755 TAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGG 1328814 Query 16820 TCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGC 16877 ||| || | |||||| ||||| || || || |||||| | | | ||||||| Sbjct 1328815 TCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCGATGGTGTCGC 1328872 Query 16878 CGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| |||| | ||| || || ||||| ||||| || || || |||||||| Sbjct 1328873 TCGGCTCCACCTCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1328930 Score = 109 bits (120), Expect = 4e-19 Identities = 159/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 16715 CGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTT 16774 || || | ||| |||| ||||||||||||||||| || ||||||||||| || | || Sbjct 1329124 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTG 1329183 Query 16775 TTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCC 16834 | | ||||||| || ||||| || | || || ||||| |||||| || | |||| Sbjct 1329184 CGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCC 1329243 Query 16835 TCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCA 16892 || ||||| || || || |||||| | | | ||||||| |||||| |||| Sbjct 1329244 TCCTTGTCCTGGATCTTGGC--CTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCA 1329301 Query 16893 CGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | ||| || || ||||| ||||| || || || |||||||| Sbjct 1329302 GCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1329344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085556180050