Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq21 118 1e-21 seq13 102 1e-16 >seq21 Length=1153175 Score = 118 bits (130), Expect = 1e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126180 GGTGTAAATGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||| | |||||||| |||||| ||||||||||| | | ||||| || ||||| Sbjct 898244 GGTGAAGATGTAGCGACCAGCTGCATGGTCCTTGCCTCCGTGAAGACGCGTACCGAACTG 898185 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 || ||| || || | |||| |||||| ||||||||||||||||| | | ||| Sbjct 898184 GCCATCCTTGCGCAGCAGCGGCACGTTGTTGCTGCCCACAAAGTCCTGCGCCATCCCGAC 898125 Query 126300 AATGGTCTCGCAC-AGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 || |||| |||| || ||||||||| || | |||| ||| ||||||| ||||||| Sbjct 898124 GATCGTCT-GCACGAGCGACTGCTCGCCATGGTGGTAGGCGGAGTGCTCGGAGACGTAGC 898066 Query 126359 CGCTCAGCTGCGCAACCTTGAT 126380 || |||||| |||||||||| Sbjct 898065 CGGCAAGCTGCACAACCTTGAT 898044 >seq13 Length=729228 Score = 102 bits (112), Expect = 1e-16 Identities = 146/203 (72%), Gaps = 16/203 (8%) Strand=Plus/Minus Query 15401 TTTATGGGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCACGCG 15460 ||| | || |||| ||||| || || ||||| |||||||| | |||||||||||||||| Sbjct 2459 TTTTTCGGGCCGATCTACTACCAACGCCTCAAGCACATGGTGACGGACAAGATGCACGCG 2400 Query 15461 CGATCGCACGGACAGGTGACGACGCTCCA-------TCGCCAGCCCAACTG-CGGTCGAT 15512 || || ||| | | | |||||||| ||||||| ||||||| ||||| | Sbjct 2399 CGCTC-CACCG------GCCCACGCTCCATGCTGACTCGCCAG-CCAACTGAGGGTCGCT 2348 Query 15513 CGCAAGGCGGTGGCCTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGTGCACGGCG 15572 ||| |||| || || ||| |||| |||||||| |||||||| | | |||| | Sbjct 2347 CGCGCAGCGGCGGTCTGCGCGTTGGTGAGATGGAGCGCGACTGCATGGTCGCCTACGGAG 2288 Query 15573 CCACCCAATTCCTCAACGAGCGC 15595 || || | | |||||||||||| Sbjct 2287 CCTCCAATCTGCTCAACGAGCGC 2265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611388217012000