Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq15 111 3e-19 seq21 104 5e-17 >seq15 Length=633270 Score = 111 bits (122), Expect = 3e-19 Identities = 260/388 (67%), Gaps = 7/388 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| |||| ||| ||||| | |||||| |||||||| || | || Sbjct 479027 TCGAAGAAGTTCGTCTTACCCTGCAGCGAGATCATCTCCATAAAGTCGAATGGCTGCGTC 479086 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | || || | |||| | || || ||||| ||||| | Sbjct 479087 GCGTTGTAGTGCTTCTCCTCACCGAGCGAGACGAGCAGTCGATCCGCCACGAACTCGATG 479146 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| |||||| || |||||||||||||||| || || | || || |||||| Sbjct 479147 TACTGCGCCATCAACTCCGAGTTCATGCCAATCAGTCGCACCGGCAGCGCGTCGCAGATG 479206 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || ||| || || || ||| | | || || ||| | | ||| |||| Sbjct 479207 AACTCGCGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCTCGCGAGGCAGC 479266 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| | | | || ||||| || || ||| || | || ||| || ||||||| Sbjct 479267 TTGTGCCTGATGTGCGAGTTGTACAAGAGGCACGCGAAGTCCGT--GTGTAGGCCCTCGT 479324 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 |||| ||||| ||||||| | || || ||||||| || || ||| | |||| Sbjct 479325 CGCGCGAGATGAGCTCGTTGCTAAACGTTAGCCCCGGCATCAGGCCGCGCTTCTTCAGCC 479384 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAA 251945 |||| | ||||| || || || || || Sbjct 479385 AGAACAGCGCGCAGAATGAGCCCGAAAA 479412 >seq21 Length=1153175 Score = 104 bits (114), Expect = 5e-17 Identities = 204/300 (68%), Gaps = 14/300 (5%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTATGATGTGGAGCGTTCTAT 218573 ||||| ||||||||||||||||||| ||| |||| | || ||||| || Sbjct 897909 GACTTTGTCGACAAGGAGCTCATTCTCTTCTCCATCGCCGACTG----CGAGCGCAGCAT 897964 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || |||| | | || ||| ||||||| ||||| |||||||| || || ||||| Sbjct 897965 CCCGAGCGCGATCGACGGCTTCAAGCCGGGTCAGCGCAAGATCCTTTTCTCCTGCTTCAA 898024 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 ||| ||| |||| | || ||||| | ||| || | || || || ||||| || Sbjct 898025 GCGCAACTTGGTGAACTCCATCAAGGTTGTGCAGCTTGCCGGCTACGTCTCCGAGCACTC 898084 Query 218694 TGGCTACCATCACGGTGAGCAGAGTC---TGCAGGGTGCCATTGTAGGCATGGCACAGGA 218750 | |||||| || || |||||| | ||||| | || || || ||||| ||||| Sbjct 898085 CGCCTACCACCATGGCGAGCAGTCGCTCGTGCAG---ACGATCGTCGGGATGGCGCAGGA 898141 Query 218751 CTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810 || ||||||||| |||||| || |||||| | | || ||||| ||| | ||||| Sbjct 898142 CTTTGTGGGCAGCAACAACGTGCCGCTGCTGCGCAAGGATGGCCAGTTCGGTACGCGTCT 898201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830281266295