Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq30 143 6e-29 seq15 84.2 5e-11 >seq30 Length=2596710 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || || || || | |||| || || ||||| || ||||| ||| Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || |||||||| || || | ||||||| || || Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||| ||||||||| ||||| || ||||| ||||| |||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1328930 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || || | |||| || || ||||| || ||||| ||||||||||| || || Sbjct 1329133 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 1329192 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||| ||||| || ||||| || || || ||| Sbjct 1329193 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1329252 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || |||||||| || || | ||||||| || || || |||| ||||||| Sbjct 1329253 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTC 1329312 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| ||||| |||||||| Sbjct 1329313 TTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1329344 >seq15 Length=633270 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTA-TGATCGGTATGAATGCCGATCTCATGAA 269177 |||||||| || ||||| | || || | | |||| || ||||| | || | ||| Sbjct 479211 GAGTTCATCTGCGACGCGCTGCCG-GTGCGACTGATTGGCATGAACTCGGAGTTGATGGC 479153 Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 || || ||||| |||||||| ||||| | || | |||||| | ||||| || Sbjct 479152 GCAGTACATCGAGTTCGTGGCGGATCGACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTA 479093 Query 269238 CAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTT 269297 ||| ||| | | || |||| ||||||||| | || ||||| | || ||||||||||| Sbjct 479092 CAACGCGACGCAGCCATTCGACTTTATGGAGATGATCTCGCTGCAGGGTAAGACGAACTT 479033 Query 269298 CTTCGAAAAG 269307 |||||| ||| Sbjct 479032 CTTCGAGAAG 479023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646918410610