Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq21 248 9e-61 >seq21 Length=1153175 Score = 248 bits (274), Expect = 9e-61 Identities = 582/870 (67%), Gaps = 30/870 (3%) Strand=Plus/Plus Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||||| || || ||| || | ||||| |||||| ||||||||||||||| || | | Sbjct 324851 GAGCGTCCACAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAG 324910 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAA----GA--GGTAT----ACCATGGC 93893 || || || | ||||||| || | | || ||| | ||| || Sbjct 324911 AACGT-------GCGT---GAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGC 324960 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 ||| |||||||| |||||||| || ||||| ||| || ||| ||||| |||||| | Sbjct 324961 CACACCGACCCTCTTCAACGCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGT 325020 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | || |||| |||| ||| ||| || | ||||| || ||||| || || || Sbjct 325021 GGCGTCGAAGGACGACAGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGAT 325080 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 | || || || || ||||| | || ||| || | || ||| || ||| Sbjct 325081 CAGCAAGGCGGCTGGCGGCATCGGCCTGCACGTGCACAACATCCGCGCCGCTGGAAGCTA 325140 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| ||||||||||| || ||||| ||||| || ||||| || ||||||||||| Sbjct 325141 CATTGCCGGAACCAATGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAA 325200 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || ||||||||||||||||| || || | | | ||||| | ||||| ||||| || Sbjct 325201 CACTGCCCGCTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCT 325260 Query 94194 CGAGCCCTGGCACGCGGACGT-GCAGGCTTTCATCGACCTGCGAAAG---AACCACGGCA 94249 ||||| |||||||| ||||| |||||| | | |||| ||| ||| |||| Sbjct 325261 TGAGCCATGGCACGCCGACGTCTTTGGCTTT--TTG--CTGCTGAAGCGCAACACGGGCA 325316 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | ||| | | || | ||||||||||| || || ||||| ||||| | || |||| Sbjct 325317 AAGATGACCAACGCGCTCGCGACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGA 325376 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||| | |||| || | ||||| || || || || Sbjct 325377 AGCGTGTAAAGAGCGAGGGGAAGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCA 325436 Query 94370 CCGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAG 94428 |||| | ||| | ||| ||| | || | || ||||| || ||||| Sbjct 325437 GCGACTGCTATGGTGAAGAGTTCGAGCGAC-TCTACGAGCGCTACGAGGCGGAGGGCCGC 325495 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | |||| || | || | || ||||| | ||| |||| ||| | ||| Sbjct 325496 GGCGTGAAGACGATTCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAG 325555 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 ||||| ||| | |||||||| ||||||| | |||| |||||| |||||| || || Sbjct 325556 ACGGGCGGGCCGTTCATCTTGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAAC 325615 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 ||||| ||||||| |||||||| |||||||||||||||| ||||| || || ||||| Sbjct 325616 CTCGGTACGATCAAGTGCTCGAATTTGTGCACCGAGATTGTGGAGTACACGTCGCCGGAG 325675 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 |||| || ||||||||||| | ||| ||| Sbjct 325676 GAGACGGCCGTGTGTAACCTTGCCTCTATC 325705 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 95098 CTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTC 95157 || || || |||||||| || || ||||| ||||||| || ||||||||||||| ||| Sbjct 326159 CTGGTTGCGCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAACGAGTGCTTC 326218 Query 95158 GAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATC 95217 || || |||||||| ||| | || |||| ||||| ||| || ||||| || || Sbjct 326219 GAGCCTTTCACCTCAAACATTTATGTTCGGCGTGTGCTGAGCGGCGAGTTCCCTGTGGTC 326278 Query 95218 AACAAGCACCTCCTACGGGACCT 95240 ||||| ||||| | |||||| Sbjct 326279 AACAAATACCTCGTCATGGACCT 326301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720138900200