Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq21 358 7e-94 seq15 176 4e-39 seq30 87.8 2e-12 >seq21 Length=1153175 Score = 358 bits (396), Expect = 7e-94 Identities = 989/1480 (67%), Gaps = 61/1480 (4%) Strand=Plus/Minus Query 153006 ATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTC 153065 |||||||| || | ||| | ||||||||| | |||||||| || ||| || | Sbjct 326304 ATGAGGTCCATGACGAGGTATTTGTTGACCACAGGGAACTCGCCGCTCAGCACACGCCGA 326245 Query 153066 AAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTG 153125 | ||| | || |||||||| || ||| | ||||| ||||| || || || | ||| Sbjct 326244 ACATAAATGTTTGAGGTGAAAGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTG 326185 Query 153126 GTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCG---TGCGCTCGAATG 153182 | ||||| |||||| ||| |||| || || || |||| |||| ||| ||| | Sbjct 326184 GACGCGGTTGGCATGGGCGCAACCAGTAATGAGTTGCGCATGCCGACCTGC-CTCACCT- 326127 Query 153183 TCGTCCTTCAACGCCTG--CCAATCCCACAGCGCCGACGGT---GTCGCG-----TTCCA 153232 || ||||| | | ||| ||| ||||| ||| | || || |||||| ||||| Sbjct 326126 TC-TCCTTGA--GGCTGGCCCAGTCCCA--GCGACCACTGTTCGGTCGCGCGTTCTTCCA 326072 Query 153233 CATGTCGTACTGTAACACTCC-TCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGC 153291 |||||| |||| | | || ||| ||||| || |||||| || || ||| || Sbjct 326071 CATGTCAAACTGGAGAATGCCCTCG-CTGGCCGGGCTGCCGTTGAAGGTCTCGTACGGGC 326013 Query 153292 CGTCGCGTTGGGCCAGTTCGCAGCTA-GCCTCGAGCGCGCCATAGTATATGGTTTCGGCG 153350 | || ||||| || || | | | ||||| ||| | |||| ||||| ||| | Sbjct 326012 CCTCCTCCCTCGCCAGCTC-CATCGACGACTCGACCGCCGCGAAGTAGATGGTCTCGAAG 325954 Query 153351 ATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT--CGTACGGCATGCGCAGCAGCACAA 153408 || | | || | || || || || |||| | |||||| |||| || | | Sbjct 325953 ATCTCTGCGTTTA--ACCGCTGCGCCTCCGCTGAGACAAACGGCAGCCGCATGAGGATGA 325896 Query 153409 AGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCC 153468 | | ||| || |||||||| | ||| | ||||| ||| || | | ||||||||| | Sbjct 325895 AAGTGTCCGCAAGACCCTGCACACCAAGGCCGACGGGGCGGTTGCGCATGTTGCTGCGGC 325836 Query 153469 TCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCA 153528 ||| || | | || |||| ||||| || |||| || || |||||| | | Sbjct 325835 GCGCCGTCTCCACAGGGTAGTAGTTGCGGTCAATAACCCGATTCAGATTGCGCGTGATCT 325776 Query 153529 CTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGT-CATTTCGTCGACGCGTACGCAT 153587 || || | | | || || | | | | ||| |||| | ||| | Sbjct 325775 GCTTTGTCACGGTGTAGAGAAGCTGGTGGTTGAACTCGCGCTTC-TCGATGTCGACGAAG 325717 Query 153588 CGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTG 153646 ||| || || ||||| || || ||||| ||||||||||| || |||| || |||||| Sbjct 325716 CGAGGCAGCGCGATAGAGGCAAGGTTACACACGGCCGTCTCCTCCGGCGACG-TGTACTC 325658 Query 153647 CACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTT 153706 ||| ||||||| ||| | || ||| || || || | || | ||| || || Sbjct 325657 CACAATCTCGGTGCACAAATTCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTT 325598 Query 153707 GCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGAC 153766 || ||||||||||| ||| | | ||| |||| ||||| ||||||| |||| || | Sbjct 325597 GCTGTTGCACGCGTCCTTGTACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAG 325538 Query 153767 GAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTC 153823 ||| ||||| || |||||||| | | | || | ||||||||| ||| Sbjct 325537 GATGGCAAACCA---CACCTCCTGCGCCTGAATCGTCTTCACGCCGCGGCCCTCCGCCTC 325481 Query 153824 GTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACAC-T 153882 ||| |||||||| |||||||| ||||| || || ||||||||| |||||| || ||| | Sbjct 325480 GTAGCGCTCGTAGAGTCGCTCGAACTCTTCACCATAGCAGTCGCTGAGGCCCGGGCACGT 325421 Query 153883 GATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCG 153942 | || || | |||||||| |||| | | ||| || || || |||||||| ||| | Sbjct 325420 GTTGGGGTC-CATCAGCGTCCACTTCCCCTCGCTCTTTACACGCTTCATGAACAAATCTG 325362 Query 153943 GCACCCAGAGCGCGTACATGAGGTCGCG--CGCCTTGCAATCCTCCGCGCCCATGTTGCG 154000 | ||||| ||||| || | ||||||||| ||| ||| || || |||| ||||||| Sbjct 325361 GGACCCACAGCGCATAGAAGAGGTCGCGAGCGCGTTGG--TCATCTTTGCCCGTGTTGCG 325304 Query 154001 TTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGC 154060 ||||| | | || | ||| |||||||||||| || |||| ||||||||| | ||| Sbjct 325303 CTTCAGCAGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGC 325244 Query 154061 ACCTTTACGCTT---TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCAC 154117 || || ||||| |||||||| || |||| ||| | | |||||||||||||||| Sbjct 325243 GCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAG 325184 Query 154118 CATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGG 154173 ||| || | || ||| | | ||||| ||||| || ||| | ||| | || || Sbjct 325183 CATCGGCACGAGCCCGTTCGACGTGCCATTGGTTCCGGCAATGTAGCTTCCAGC----GG 325128 Query 154174 CGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT-ATGGCAGCGCA 154231 |||| | | ||||||| | ||| |||||||| |||| | ||| | || | ||||| Sbjct 325127 CGCGGATGTTGTGCACGTGCAGGCCGATGCCGCCAGCCG--CCTTGCTGATCACGGCGCA 325070 Query 154232 GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGT-CGCGGACGCCGAGCAAGAAAC 154290 || |||||| |||||||||||| ||||| |||| | |||||| | || ||| | Sbjct 325069 CTCCTTCAGCGTGTCGTAGATGCCGTCAATGCTGTCGTCCTTCGACGCC-ACCAGGAAGC 325011 Query 154291 ACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAA 154350 |||| | ||||||||| | | || || || |||||||| || | ||||| || | Sbjct 325010 ACGAGCTCATTTGCGGCTTTGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGA 324951 Query 154351 ACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAA 154410 | | | ||||| ||| || || ||| |||| ||| |||||||| Sbjct 324950 AGAAACCCTTCGACATCAGCTCGTATGTCTCACGCACGTTCTCGAGATCCCGGCCGTGAA 324891 Query 154411 TGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTC 154450 | ||||| ||||| ||||||| ||| ||||| ||||| || Sbjct 324890 TCCCGAGGGCGACACGCATGAACATCTGCTGTGGACGCTC 324851 >seq15 Length=633270 Score = 176 bits (194), Expect = 4e-39 Identities = 373/540 (69%), Gaps = 15/540 (3%) Strand=Plus/Minus Query 52304 GCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGA 52362 ||||||| | ||| || || ||| | |||||| | || ||||| ||||||| | Sbjct 479539 GCTGCTGCACGCGATCCAG-ACGATCCCGTGCATCAAGAAGAAGGCAGAGTGGGCCGTAC 479481 Query 52363 AGTGGATCGAGAGCGACACCGCCACGCTGGCCG-AGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||||| |||| | ||| | ||| | | |||| || | | || ||| || Sbjct 479480 GGTGGATCGGGAGC---AGCGCGA-GCTTCCAGGAGCGGCTGATCGGGTTTGCCGCGGTG 479425 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 |||||| | || ||||| ||| || ||| | || | | || | | ||| | Sbjct 479424 GAGGGCATCTTCTTTTCGGGCTCATTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGCCTG 479365 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 ||||| || || ||||| ||||||||| | || ||||||||||| || || ||||||||| Sbjct 479364 ATGCCGGGGCTAACGTTTAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGAC 479305 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCT 52600 || |||||||||| ||||| ||| | | | | || || | || | || | Sbjct 479304 TTCGCGTGCCTCTTGTACAACTCGCACATCAGGCACAAGCTGCCTCGCGAGCGCGTGCTG 479245 Query 52601 GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 ||| || || ||| |||||| ||||| ||||| | | |||||||||||| Sbjct 479244 GAG-ATCATCGTGGACGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGT 479186 Query 52661 -CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG-AGTACATCGAGTTTGTGGCGGAT 52718 ||| ||| | ||||||||| || ||| ||| ||| ||||||||||||| ||||||||| Sbjct 479185 GCGA-CTGATTGGCATGAACTCGGAGTTGATG-GCGCAGTACATCGAGTTCGTGGCGGAT 479128 Query 52719 CGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGC-TCGCAATCCGTTTGAGTT 52777 || ||| | || |||||| || ||| ||| |||||| ||| | || || || || Sbjct 479127 CGACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTACAACGCGACGC-AGCCATTCGACTT 479069 Query 52778 TATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| | | || ||||| |||| ||||| ||||| ||||||||| || |||||||| Sbjct 479068 TATGGAGATGATCTCGCTGCAGGGTAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTA 479009 >seq30 Length=2596710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||||| ||| ||||||| Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| || || || || || || || || ||||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATG 1328931 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||| || || || |||| Sbjct 1329151 GACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCG 1329210 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 1329211 AAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 1329270 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||| ||||||||| | || | ||| || || || || || || Sbjct 1329271 TTCTCGATGGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTC 1329330 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 1329331 ACGAAGATCTGCATGACT 1329348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259329376400