Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq30 109 5e-19 seq15 109 5e-19 >seq30 Length=2596710 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| ||||| || | ||| ||||| || || || ||||| || | Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||||| |||||||| || || || Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||| | | |||| |||||| | ||| || Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | | | ||| |||||||| || || || || || ||||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATG 1328931 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| ||||| || | ||| ||||| || || || ||||| || | | |||||| Sbjct 1329130 CGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCC 1329189 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||||| |||||||| || || || |||||||||||| Sbjct 1329190 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 1329249 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | |||| |||||| | ||| || || | | | | Sbjct 1329250 TCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAGCGCGATC 1329309 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || |||||||| || || || || || ||||||||| || Sbjct 1329310 GTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCATGACT 1329348 >seq15 Length=633270 Score = 109 bits (120), Expect = 5e-19 Identities = 293/443 (66%), Gaps = 14/443 (3%) Strand=Plus/Minus Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGGCGATATTT 47201 |||||| || ||| || |||||| ||||||| |||||| || |||| || | || Sbjct 479444 TGATCGGGTTTGCCGCGGTGGAGGGCATCTTCTTTTCGGGCTCATTCTGCG-CGCTGTTC 479386 Query 47202 TACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGA 47261 | |||| | || | ||||| || || ||||||||||||||||| |||||| | Sbjct 479385 TGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTAACGTTTAGCAACGAGCTCATCTCGCGC 479326 Query 47262 GACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAG 47321 ||||| ||||| ||||| |||| || || |||| |||||| | || || ||| Sbjct 479325 GACGAGGGCCTACACACGGACTTCGCGTGCCTCTTGTACAACTCGCACATCAGGCACAAG 479266 Query 47322 TTGGACGTGCCCACCGTCAGC--GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379 || | | | | || || || || | | || || || ||| ||| |||| Sbjct 479265 CTG--CCTCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGCGAGT 479208 Query 47380 TTTTCGCCGAGGCTCTGCC----CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGA 47435 | || ||| || ||||| ||| | || || |||||| ||||| ||||| Sbjct 479207 TCATCTGCGACGCGCTGCCGGTGCGACTGATT----GGCATGAACTCGGAGTTGATGGCG 479152 Query 47436 AAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTAC 47495 |||||||||| || || || || || |||||||| ||| | ||| ||| Sbjct 479151 CAGTACATCGAGTTCGTGGCGGATCGACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTAC 479092 Query 47496 CACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTT 47555 || | | | |||||||| |||||| | | || ||||| |||| ||||| ||||| Sbjct 479091 AACGCGACGCAGCCATTCGACTTTATGGAGATGATCTCGCTGCAGGGTAAGACGAACTTC 479032 Query 47556 TTCGAGAAGCGCGTCGGCGAATA 47578 ||||||||| || ||||| || Sbjct 479031 TTCGAGAAGAAGGTGGGCGAGTA 479009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497857838800