Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq21 120 3e-22 seq15 84.2 2e-11 >seq21 Length=1153175 Score = 120 bits (132), Expect = 3e-22 Identities = 538/840 (64%), Gaps = 17/840 (2%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || || ||| ||||||| ||||| | || | ||||| || || |||| |||| | Sbjct 324860 CAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAGAACGTGCGT 324919 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||||| ||||||| | || ||||| ||||| | || || | ||| | Sbjct 324920 GAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGCCACACCGACCCTCTTCAAC 324979 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 |||||||| ||| || || ||||| || || | | | | || |||||| Sbjct 324980 GCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGACAGC 325039 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 || ||| ||||| || || || || ||||| |||| ||| | |||||| Sbjct 325040 ATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCTGGCGGC 325099 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGC-GGAAGCCGCATCAGAAGCACCGACGG 123214 || ||| || |||||||| || | | | |||| |||||| ||| | ||| | || Sbjct 325100 ATCGGCCTGCACGTGCACAACATCCGCG-CCGCTGGAAGCTACATTGCCGGAACCAATGG 325158 Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 | | |||||||| | |||||||| || | ||| ||| | | || |||| || Sbjct 325159 CACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACACTGCCCGCTACGTGGA 325218 Query 123275 CCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 |||| |||||||| ||||| ||||| | || |||| || || || ||||||| || Sbjct 325219 CCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACGCCGA 325278 Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391 || | | ||||| | || ||||||| ||| || || | || ||||| Sbjct 325279 CGTCTTTGGCTTTTTGCTGCTGAAGCGCAACACGGGCAAAGATGACCAACGCGCTCGCGA 325338 Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGT 123451 | || || || | ||||| || |||||||| ||| || ||||| ||| || Sbjct 325339 CCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGAAGCGTGTAAAGAGCGAGGGGAA 325398 Query 123452 GTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTT 123511 |||| |||| ||| ||| | ||| || ||| | |||||| || || | |||| Sbjct 325399 GTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCAGCGACTGCTATGGTGAAGAGTT 325458 Query 123512 TGA-CGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG-GTTAGTCAGGTTCCGGCA 123569 || ||| | |||| || |||||| ||| ||| | | || | | ||| ||| Sbjct 325459 CGAGCGA-CTCTACGAGCGCTACGAG-GCGGAGGGCCGCGGCGTGAAGACGATTCAGGCG 325516 Query 123570 CGTGATTTGTTCAAATTT---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATG 123626 | || ||| ||| || | || | || |||| || || ||||| ||| Sbjct 325517 CAGGAGGTGT---GGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTTCATC 325573 Query 123627 CTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGT 123686 | ||||| ||||| |||||||| || | || |||| ||| | || || || || || Sbjct 325574 TTGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGGTACGATCAAGTGC 325633 Query 123687 AGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC-GATCAAGTGGCCGTGTGTAA 123745 ||| | ||| |||| ||| | || |||| || ||| || | |||||||||||| Sbjct 325634 TCGAATTTGTGCACCGAGATTGTGGAGTACA-CGTCGCCGGAGGAGACGGCCGTGTGTAA 325692 >seq15 Length=633270 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 138369 TTGTAATACAAGCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTG 138428 ||||| | | |||||| |||| ||||||| || |||||||| ||||| || |||||| Sbjct 479285 TTGTACAAGAGGCACGCGAAGTCCGTGTGTAGGCCCTCGTCGCGCGAGATGAGCTCGTTG 479344 Query 138429 CTAAACGTCAGCCCCGGCATGACGCC 138454 |||||||| ||||||||||| | ||| Sbjct 479345 CTAAACGTTAGCCCCGGCATCAGGCC 479370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000403230200