Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq21 228 1e-54 >seq21 Length=1153175 Score = 228 bits (252), Expect = 1e-54 Identities = 910/1408 (65%), Gaps = 57/1408 (4%) Strand=Plus/Minus Query 115841 TGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 115900 |||| ||| ||||||| || ||||| ||| ||||| || || || | | Sbjct 326303 TGAGGTCCATGACGAGGTATTTGTTGACCACAGGGAACTCGCCGCTCAGCACACGCCGAA 326244 Query 115901 GATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 115960 ||| ||||| | ||| | ||||| |||||||| ||||| || | || || | |||| Sbjct 326243 CATAAATGTTTGAGGTGAAAGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGG 326184 Query 115961 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT 116020 | || || |||||||| || | || | |||||| | || ||| ||| | | Sbjct 326183 ACGCGGTTGGCATGGGCGCAACCAGTAATGAGTTGCGCATGCCGACCTGCCTCACCTTCT 326124 Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC---TCCCCC----TCCCACATATCA 116073 |||||||| | ||||||| || || | ||| || | | | |||||| ||| Sbjct 326123 CCTTGAGGCTGGCCCAGTCCCAGC-GACCACTGTTCGGTCGCGCGTTCTTCCACATGTCA 326065 Query 116074 AACTGGAGGATACCTTGGGACGCTGGC---GATCCC-TCAAATGTCTCATATGGGCCCTC 116129 |||||||| || || | ||||||| | | || | || ||||| || |||||||| Sbjct 326064 AACTGGAGAATGCCCT----CGCTGGCCGGGCTGCCGTTGAAGGTCTCGTACGGGCCCTC 326009 Query 116130 AACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCG 116189 || ||||| || || ||||| || ||| || || ||||| || || Sbjct 326008 CTCCCTCGCCAGCTCCATCGACGACTCGACCGCCGCGAAGTAGATGGTCTCGAAGATCTC 325949 Query 116190 AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATC 116249 || || | || ||||| | || |||||| || || | || || || Sbjct 325948 TGCGTTTAACCGCTGCGCCTCCGCTGAGACAAACGGCAGCCGCATGAGGATGAAAGTGTC 325889 Query 116250 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGT 116309 ||| ||||| || ||||| ||||| | ||||| | | ||| || || || || Sbjct 325888 CGCAAGACCCTGCACACCAAGGCCGACGGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGT 325829 Query 116310 CTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 116369 |||||| || || | || | || ||||||| ||| ||||| |||| |||||| Sbjct 325828 CTCCACAGGGTAGTAGTTGCGGTCAATAACCCGATTCAGATTGCGCGTGATCTGCTTTGT 325769 Query 116370 GA---TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 116426 | | | |||||| | || | || | ||| |||| | ||| | ||| Sbjct 325768 CACGGTGTAGAGAAGCTGGTGGT--TGAACTC-GCGCTTCTCGATGTCGACGAAGCGAGG 325712 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 || ||||| || || || |||||||| | ||||| ||| |||||||| | ||| Sbjct 325711 CAGCGCGATAGAGGCAAGGTTACACACGGCCGTCTCCTCCGGCGACGTGTACTCCACAAT 325652 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 || || |||||||| || | ||| || || || | |||||| || |||||||| |||| Sbjct 325651 CTCGGTGCACAAATTCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTGTT 325592 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||||| |||||||| | || | ||| |||||||| | || |||| || || || Sbjct 325591 GCACGCGTCCTTGTACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGC 325532 Query 116607 CTTCCATACATCG-GCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCTCGTACT 116662 ||| || || ||| ||| | | | || | | || |||||| ||||||| Sbjct 325531 AAACCACACCTCCTGCGCCTG----AATCGTCTTCACGCCGCGGCCCTCCGCCTCGTAGC 325476 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCA--CAGCCTCTGAGAGCCCTGGTGCCTTATC 116720 |||||| ||| ||||||||||| ||| | ||||| |||| || | | | Sbjct 325475 GCTCGTAGAGTCGCTCGAACTCTTCACCATAGCAGTCGCTGAG-GCCCGGGCACGTGTTG 325417 Query 116721 TGGACAGAAGAGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGA 116779 || | | || | ||| || || | ||| | | | ||||||||||| | ||||||| Sbjct 325416 GGGTCC-ATCAGCGTCCACTTCCCCTCGCTCTTTA-CACGCTTCATGAACAAATCTGGGA 325359 Query 116780 TCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC----CCCCTGATTGAGA 116835 ||| ||||| ||||||| || ||| ||| || ||||| ||| || ||| | Sbjct 325358 CCCACAGCGCATAGAAGAGGTCGCGAGCGCG---TTGGTCATCTTTGCCCGTG-TTGCGC 325303 Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || | ||||||| | | || || |||||||| || || ||||| || |||| | Sbjct 325302 TTCAGCAGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCG 325243 Query 116896 CCCTTGCGA---CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 |||||||| | || |||||| || || | || || ||| || ||||| ||| Sbjct 325242 CCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGC 325183 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTG--GCTC 117010 || || | || || | || |||||| || || ||| || ||| | || | Sbjct 325182 ATCGGCACGAGCCCGTTCGACGTGCCATTGGTTCCGGCAATGT-AG-CTTCCAGCGGCGC 325125 Query 117011 TGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCG 117070 || | ||| | ||||| || || || || ||| ||| ||| ||||||||| Sbjct 325124 GGATGTTGTGCACGTGCAGGCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCT 325065 Query 117071 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 117130 | || || ||||||| || || || ||| |||| || | |||||||| || Sbjct 325064 TCAGCGTGTCGTAGATGCCGTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCA---CG 325008 Query 117131 A---CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA 117187 | |||||| ||| |||| || || |||||||||||||| ||||| |||||| |||| | Sbjct 325007 AGCTCATTTGCGGCTTTGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGA 324948 Query 117188 TACCTTGGGACATCTTATCGTAGGTCTC 117215 ||| | |||||| ||||| ||||| Sbjct 324947 AACCCTTCGACATCAGCTCGTATGTCTC 324920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503403924200