Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq21 329 4e-85 seq19 214 2e-50 >seq21 Length=1153175 Score = 329 bits (364), Expect = 4e-85 Identities = 854/1295 (66%), Gaps = 25/1295 (2%) Strand=Plus/Plus Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||||| || ||||| | || |||||||| || | | || | || ||| Sbjct 1056618 GTCGAGAAGATCTGACTCTTCTTGGTCGGGATCGTCGTGTTGCGCTTGATGAGCGCCGTC 1056677 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || || || | || || | ||| || |||||||||| || | |||| Sbjct 1056678 ATCACGCCGCCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAGG 1056737 Query 6989 TCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 | | | | | | | ||| | ||||| | |||| || || |||| || |||| Sbjct 1056738 CCCTC--CGTCTGCTTGCTCTTGCCGCCCGTCAGGATGAACGCCTGCACCGCGGCGCCGT 1056795 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 | ||||| ||||| |||||||| || | || ||||| || |||||| || | |||| Sbjct 1056796 ACGCGACAGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCCTTACCGCCGAAGAAGTCCG 1056855 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 | | | || | ||||| || || ||||| || || |||| || | || | || Sbjct 1056856 ACACGAGGGACTGCACCTTCGGAATGCGCGTCGACCCGCCCACCAGCACCACGTCGTGCA 1056915 Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTAC 7226 | | || || ||||| | ||| | || || || || | ||| | | Sbjct 1056916 CGGTGCGCTTGTCCATCTTGGCGTCCTGCAGCACGCGCTCCACCGGCTGCATCGTACTGC 1056975 Query 7227 GGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAA 7286 |||||| ||| ||||| ||||| || || || || || |||| | | ||| || | Sbjct 1056976 GGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCGCGCGTGATGGTGGCCTGGAAGTCGA 1057035 Query 7287 CGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCT 7346 || |||| ||| | || || || || |||| || | || || || | ||| |||| Sbjct 1057036 CGTTGTCGAATAGGGCGTCGATCTCGATCGTTGCCTGCGTCGCGGACGACAGCGTGCGCT 1057095 Query 7347 TTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTT 7406 | |||||||| |||||||| || | ||| || || || ||| || | | | || | Sbjct 1057096 TCGCGCGCTCGCACGCCGTGCGCAGACGGCGCAGCGCGCGCTGGCTCGACGTCAGGTCCT 1057155 Query 7407 T---CTTATGTTTACGTTTAAACTCTTCAGAGAAG----TGTCGAAGGAGTCTCGAATCG 7459 | ||| | || || || ||||| ||| |||| || ||| | || ||| Sbjct 1057156 TACCCTTGTTCTTGCGCTTGAACTCGTCACTGAAGAACGTGACGAGGCGGTTG----TCG 1057211 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || ||||| || | ||| ||||| || ||||| || || || ||||| || || Sbjct 1057212 AAGTCCTCACCGCCAAGGTGCGTATCGCCGTTCGTCGCCTTCACCTCGAAGATGCCGCCG 1057271 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 || ||| | | || || ||||| ||||| || || || ||||| || || || ||||| Sbjct 1057272 TCGATGGTCAGCAGCGTCACATCGAACGTGCCGCCGCCAAGGTCGAAGATCAGCACGTTG 1057331 Query 7580 GTATCGTCGTCTTTGTTC---TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | | | | || || || || ||||||||||| ||||||||||| || || Sbjct 1057332 CGCTCCTTGCCGTCGTCACCTTTGTCCAGGCCGTACGCGATGGCCGCCGCCGTCGGCTCG 1057391 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || | ||||||||| || || | || || |||||||| || || Sbjct 1057392 TTGATGATGCGCAGCACCTCCAGGCCAGCGATCGTGCCGGCGTCCTTCGTCGCCTGGCGC 1057451 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| || || ||||| || || || | | | || | ||| || || Sbjct 1057452 TGCGAGTCGTTGAAGTATGCTGGCACCGTCACCACGGCCTTCTTCACCTGCTTGCCCAGG 1057511 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | ||||| | || ||||| || || |||||||| ||||| || | || Sbjct 1057512 TATGCCTCCGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGTG 1057571 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || |||| || ||| | | | || ||||| ||| || || | | | Sbjct 1057572 AAGCACTTCGCCTCGCCGCGATACTGCACCGAAATCACGGGCTTGTCGTCGCCCTTCGTC 1057631 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC--CTGTTGGTCCGAAAACTTTC 7934 || ||||| ||| ||| | ||||| || | || || | || ||| ||||| | Sbjct 1057632 ATCACCTTGAACGGCCAGTGCTTCATGTCCGCCTGCACAACCGT--GTCGTTGAACTTGC 1057689 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || || ||||| || || || || ||||| | |||||||| || ||||||| Sbjct 1057690 GGCCAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCT 1057749 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 |||| ||||| ||||| || || || ||||| ||||| || ||||| || |||| Sbjct 1057750 TCGCGGCGTCGCCGATCAGGCGCTC---CGAGTCCGTGAACGCAACATACGACGGCGTCG 1057806 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || ||||||||||| || || || ||||| ||||| ||||| ||||| |||| Sbjct 1057807 TGCGGTTGCCCTGGTCGTTCGCGATGATCTCCACGCGCTCGTTCTGCCACACGCCTACGC 1057866 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 |||| ||||| || || | ||| || ||||| ||| Sbjct 1057867 ACGAGTACGTCGTGCCGAGATCGATGCCGATGGCT 1057901 >seq19 Length=1032596 Score = 214 bits (236), Expect = 2e-50 Identities = 744/1140 (65%), Gaps = 41/1140 (4%) Strand=Plus/Minus Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 || || |||| ||| ||||| ||||| |||||||||||||| || | ||| || ||| Sbjct 396618 GCCTGCACCGCCGCGCCGTACGCGACGGCCTCATCGGGGTTGATGGAGCGATTGAGCTCT 396559 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 || ||| || | | || | ||| || || || |||||||| || ||||| |||||| Sbjct 396558 TTGCCGCCGAAGAACTGAGAGACCATCTGCTGGATCTTCGGGATCCGGGTCGAGCCACCG 396499 Query 7148 ACCAAAACGATTTCATTCACTTTC----GATTTATCGATCTTTGAGTCTCGAAGTGTTTT 7203 || | ||||| || ||||| | | | || || ||| | |||| || || Sbjct 396498 ACGAGAACGACGTCGTTCACATCCTGCGGCTTCAT--ATCC--GCGTCTGCCAGCACCTT 396443 Query 7204 TTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACG 7263 | || || |||| || || ||| || ||||| ||||| || || ||||| Sbjct 396442 CTTCACCGGCTCCAGGCACTTCTCAAACTGATCGCGACACATCTCCTCGAAGCGGGCACG 396383 Query 7264 GGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG 7323 || || | |||| || ||| ||||| | || || || || ||| | | Sbjct 396382 AGTGATCTTCGAGAAGAAGTCGTTGCCTTCGTACAGCGCGTCGATCTCGATGTTCGCC-- 396325 Query 7324 TGCCGTCGAA---GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 | ||| || || | ||| ||||| ||||||| || ||||| || | || || Sbjct 396324 -GTCGTGGAGCTTGACAGCGTGCGCTTCACGCGCTCGCATGCCGTACGGAGGCGGCGCGT 396266 Query 7381 GGCACGCGGGTT-AC-CGGAAATATCTTTCTTATGTTTACGT-TTAAACTCTTCAGAGAA 7437 ||| || | ||| || ||| | | | | | || ||| || | ||| | ||| Sbjct 396265 GGCGCGGGCGTTGACACGGCAGTCTTTGCCGCATCG---CGTCTTGAGCTCCGTGGCGAA 396209 Query 7438 GT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 || ||||| | || | |||||| || || || || | ||| || || ||||| || | Sbjct 396208 GTAGTCGACG-AGGCGGTTATCGAAGTCCTCGCCGCCGAGGTGAGTGTCACCCGCTGTTG 396150 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 | || || ||||| | || || ||| | | || || ||||| |||||||| |||| Sbjct 396149 CCTTCACCTCAAATACGCCGGACTCGATGGTCAGCAGCGTCACATCGAACGTACCGCCAC 396090 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCG----AGACCGTAC 7612 | ||||| || || || ||||| | || | | | | | | | ||| | |||||| Sbjct 396089 CAAGGTCGAAGATCAGCACGTTTTTCTCTCCCT-TATCTGCCTTTCGGTCCATGCCGTAC 396031 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTT 7672 ||||| || || || || || || || || || || || ||| |||||||| || | Sbjct 396030 GCGATCGCGGCGGCGGTCGGCTCGTTGATGATGCGCAGCACGTTAAGGCCAGCGATGGAG 395971 Query 7673 GCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACC 7732 | || || ||||| || ||||| ||||| ||||| ||||| ||||| || || | ||| Sbjct 395970 CCGGCGTCCTTCGTTGCCTGTCGCTGCGAGTCGTTGAAGTATGCCGGAACAGTGATGACG 395911 Query 7733 GCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACC 7792 || | | |||| | | ||||| |||| || || | || ||||| || || ||| Sbjct 395910 GCATTCTTGACGGTAGTGCCGAGGTACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACC 395851 Query 7793 ATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAAT 7851 || | || |||||||||| ||| ||| || | | || | | | || || | ||| Sbjct 395850 ATAGCGGAGATCTCTTCAG-GAAAAAATGTCTTGGACTGACTCTGATACTCGACGTTAAT 395792 Query 7852 CATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT-CGTCT- 7909 | || || ||| | | | | ||||| | | ||| | ||||| | || || Sbjct 395791 GACCGGCTT-GCCG--TCCTTGACGGTCACCTTGAAGGGCCAGTGCTTCATGTCCGACTG 395735 Query 7910 -TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 || || | | ||| |||| | ||||| | ||||| || || || || ||||| Sbjct 395734 CAGGTCCGGATCGTC---GTACTTGCGGCCGATCATGCGCTTCGCGTCGAACACCGTGTT 395678 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | |||||||| || ||||||||||| ||||| ||||| || || || | || Sbjct 395677 GTGCGGGTTCATCGCCACCTGGTTCTTCGCGGCGTCGCCGATCAGGCGCTC---CGTCTC 395621 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || || || || || ||||| || || || ||||||||||| || || || || Sbjct 395620 GGTGAAGGCCACATAGGACGGCGTCGTGCGGTTGCCCTGGTCGTTCGCGATGATCTCCAC 395561 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||||| | |||| |||||||| || ||||| || || | ||||| || || || Sbjct 395560 CTGGTCGTTCTTGAAGACACCGACGCAAGAGTACGTCGTGCCAAGGTCAATGCCAATAGC 395501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128870115800