Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq21 131 2e-25 >seq21 Length=1153175 Score = 131 bits (144), Expect = 2e-25 Identities = 558/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| | ||||||||||| ||||| |||| || || || ||| | || || Sbjct 324857 CCACAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAGAACGTG 324916 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 ||||||||||| |||||| ||| | |||| |||||| ||||| ||||||||| Sbjct 324917 CGTGAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGCCACACCGACCCTCTTC 324976 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || |||| || |||||| | || ||||| | || ||||| || Sbjct 324977 AACGCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGAC 325036 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | ||||| |||| ||| || | || || ||| ||| ||| |||||| Sbjct 325037 AGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCTGGC 325096 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGC--CAACAAGTCTCGTATTAGAGGTACAA 111909 || ||||| ||||| | || | || | || | ||| || ||| || || | Sbjct 325097 GGCATCGGCCTGCACGTGCACAACATCCGCGCCGCTGGAAG-CT-ACATTGCCGGAACCA 325154 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 |||| || | || | | || ||||| ||||| || ||| ||| || ||||| | Sbjct 325155 ATGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACACTGCCCGCTACG 325214 Query 111970 TAAACCAAGCTG--GGC-GTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||| | | ||| |||||||| | |||| ||||| |||||||||||||||| Sbjct 325215 TGGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACG 325274 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA--GGCGCGGTG 112084 | || || | | || | | || | |||| || | || || |||| | Sbjct 325275 CCGACGTCTTTGGCTTTTTGCTGCTGAAGCGCAACACGGGCAAAGATGACCAACGCGCT- 325333 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGA 112143 ||||| ||||||| || || ||| | |||||| | ||||||||| | || || | || Sbjct 325334 -CGCGACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGAAGCGTGTAAAGAGCGA 325392 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGT 112202 | || || ||| | || | || ||| | || || ||| ||| ||| | ||| Sbjct 325393 G-GGGAAGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCAGCGACTGCTAT-GGT 325450 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTG-CGACGG 112260 || ||||| || |||||| ||||||| || | || |||| || |||| Sbjct 325451 GAAGAGTTCGAGCGACTCTACGAGCGCTACGAGGCGGAGGGCCGCGGCG--TGAAGACGA 325508 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | | || || |||||| || || || |||| || | |||||| || || | Sbjct 325509 TTCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGT 325568 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 || | ||||| ||||| || ||| ||| || || ||||| | ||| ||||| Sbjct 325569 TCATCTTGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGGTACGATCA 325628 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || | || || | || || || || |||| | || || |||||||| |||| Sbjct 325629 AGTGCTCGAATTTGTGCACCGAGATTGTGGAGTACACGTCGCCGGAGGAGACGGCCGTGT 325688 Query 112441 GTAACCTCGCATCAATCGCTCTCCC 112465 ||||||| || || ||||| || || Sbjct 325689 GTAACCTTGCCTCTATCGCGCTGCC 325713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738559156400