Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq21 150 2e-31 seq16 86.0 7e-12 seq30 82.4 9e-11 seq17 82.4 9e-11 >seq21 Length=1153175 Score = 150 bits (166), Expect = 2e-31 Identities = 554/855 (65%), Gaps = 17/855 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || ||||| || || | || || || |||||||| ||| |||||||| | | Sbjct 325713 GGCAGCGCGATAGAGGCAAGGTTACACACGGCCGTCTCCTCCGGCGACGTGTACTCCACA 325654 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || ||||| || || | ||| ||||| || | ||||| ||||| ||| || Sbjct 325653 ATCTCGGTGCACAAATTCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTG 325594 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 |||||||| |||||||| | ||| | ||| |||||||| |||| |||| || || Sbjct 325593 TTGCACGCGTCCTTGTACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATG 325534 Query 106637 GCCTTCCACACATCG-GCGGCTGGTACAATGGCGTTG--GCC-CGTCCCTCCGCCTCGTA 106692 || |||||| || ||| ||| ||| | || ||| || |||||||||||||| Sbjct 325533 GCAAACCACACCTCCTGCGCCTG----AATCGTCTTCACGCCGCGGCCCTCCGCCTCGTA 325478 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGT 106751 |||||| || ||||| ||| ||| || |||| ||| || || | ||| Sbjct 325477 GCGCTCGTAGAGTCGCTCGAACTCTTCA-CCATAGCAGTCGCTGAGGCCCGGGCACGTGT 325419 Query 106752 CTGGACAGAAAAGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 || | || | ||| || || | || || || ||||||||||| | ||||| Sbjct 325418 TGGGGTCCATCAGCGTCCACTTCCCCTCGCT-CTTTACACGCTTCATGAACAAATCTGGG 325360 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 | |||||| | | ||||| || | | || || || | || |||| | Sbjct 325359 ACCCACAGCGCATAGAAGAGGTCGCGAGCGCGTTGGTCATCTTTGCCCGTGTTGCGCTTC 325300 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | | | || | | || || ||||||||||||||||| ||||| |||| | ||| Sbjct 325299 AGCAGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCC 325240 Query 106931 TTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 || || | || | || | || ||||| || ||| ||| || ||||| ||||| Sbjct 325239 TTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATC 325180 Query 106988 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATT-TATTGGCTCTCAC 107046 || | | || | || ||||| || || ||| || || | ||| | | Sbjct 325179 GGCACGAGCCCGTTCGACGTGCCATTGGTTCCGGCAAT-GTAGCTTCCAGCGGCGCGGAT 325121 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 | || | ||||| || || || |||||| ||| ||| || |||||| | || Sbjct 325120 GTTGTGCACGTGCAGGCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAG 325061 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | ||||| |||| || ||| ||||| || | |||||||| | ||| Sbjct 325060 CGTGTCGTAGATGCCGTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCAT 325001 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||||| |||| || || || ||||||||||| ||||| ||||| |||| | ||| | Sbjct 325000 TTGCGGCTTTGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGAAACCCTT 324941 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| ||||||||||| || || | || ||||| || |||| ||| Sbjct 324940 CGACATCAGCTCGTATGTCTCACGCACGTTCTCGAGATCCCGGCCGTGAATCCCGAGGGC 324881 Query 107287 CACACGCATAAACAT 107301 |||||||| ||||| Sbjct 324880 GACACGCATGAACAT 324866 >seq16 Length=742178 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136166 TCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCA 136225 || |||||||||||||| ||||||| ||||||||||||| | ||||| ||||| ||||| Sbjct 210802 TCCTATAGTGTAGTGGTTATCACTTCGGACTTTGAATCCGAAAACCCAGGTTCGAATCCT 210743 Query 136226 GGTAGGA 136232 ||||||| Sbjct 210742 GGTAGGA 210736 >seq30 Length=2596710 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 1558929 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 1558870 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 1558869 CAGGTAGGAG 1558860 >seq17 Length=806429 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 604775 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 604834 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 604835 CAGGTAGGAG 604844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977149493800